Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01115 GCGGAAGCTGCTACCATCATAGCACGCCATTCGCATCTACTTGATCGGATCTGCCCCAAAACGAACCCTAACAAACGCTCTTCCTTCGTCTCTTTGGGTTATCGCAGAAACATGGCATACGCATCTCATTTACTCAATCACTCATCACAGATGAGACATGCTTCCAAGTTGCTGCACCATGAGCGCGCTCTTTTGGTTCGTTGGTTTTCCGGCGATGCACAATCCTCTCTCAACCGGAATCGCGATGTGTGGAAAACTCAATTCTATGAGTCTTCAACCAGAATCAGTGTCTTTGAGCTTGCCTCCAGCATTACTAAGAGGAACATCTCCATGGCTACCATTAAAAGGGGTTCCATTGTTGGGTCTTTGTTCAATGGAGGGATTTCACGGTATAAGATGATAGGCCATAACTTATTTATTTTCAATCAACCATACCCTCCAAAAGAAGTTCACAGGTGCTGTCAAGGAGATGCTATGCATCAGCCTCAGGGTAACATTGCAAGATGGTTGAAGAAAGAAGGTGATAAAGTCTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCCACTGTTGAAATGGAATGTATGGAAGAAGGTTATCTAGCCAAGATAATCTGTGGGGATGGGGCAAAAGAAATTAAAGTTGGTGAGGTAATCGCTGTAACTGTTGAGGATGAGGGGGATATTGCAAAGTTTAAAGGTTACCAACCTTCTGCATCTGAACCAAGTGCACCCCCTGCCAAAGAAACATCTGCCCCACCTCCACCAAAGAGAGAGGTGGTAGAGGAGTCTGCTCGGGAACCTGAGCCAAAGGTTTCCAAACCCAGTGCACCACCTTCATCTGGAGATCGCGTATTTGCCAGTCCACTTGCTAGAAAGTTGGCTGAAGAGAAAAATGTTCCTCTCTCTAGCATTAAAGGAACAGGATCTGAGGGGCTCATTGTCAAGGCTGACATTGATGACTTCTTGGCTTCTGGTGCTAAAGAAGTTTCAGCACCCTCAAAGGCAAAGGTGGCAACAGATGCAGCATTGGATTATACAGACATTCCTGTCTCTCAGATAAGGAAGGTCACAGCTTCACGGCTCTTATTATCGAAACAAACTATTCCGCATTACTATTTAACAGTAGATACATGTGTTGACAAACTCATGAGTTTAAGGGCCAAACTCAATTCATTGCAAGAAGCCTCTGGTGGCCCCCGCATATCAGTTAATGACCTTGTAATCAAGGCTGCTGCTTTGGCTCTCCGAAAAGTTCCTCAATGTAACAGTTCATGGGCAAATGATTATATTCGTCAGTATAAAAATGTGAATATTAATGTTGCTGTTCAGACTGATAACGGGCTCTTTGTTCCAGTAATCAGGGATGCAGACAAGAAAGGCCTCTCTACAATAGGGGACGAAGTCAAACAATTGGCAAAGAAAGCCAAAGAAAACAGCTTGAAACCTCAAGATTACGAGGGAGGTACATTTACAGTGTCTAACCTGGGAGGGCCATTTGGTGTTAAACAATTCTGTGCAATCATCAATCCTCCTCAGTCAGGCATTCTTGCAGTTGGATCTGCGGAGAGGAGGGTCATTCCGGGTTCAGGTGCTGAAGAATTCAAGTTTGCTTCCTTCATGTCTGTGACACTCAGCTGTGATCATCGTGTTATAGATGGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCCAGAATCCATGTTGTTGTAA 1737 0.4433 AEAATIIARHSHLLDRICPKTNPNKRSSFVSLGYRRNMAYASHLLNHSSQMRHASKLLHHERALLVRWFSGDAQSSLNRNRDVWKTQFYESSTRISVFELASSITKRNISMATIKRGSIVGSLFNGGISRYKMIGHNLFIFNQPYPPKEVHRCCQGDAMHQPQGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIICGDGAKEIKVGEVIAVTVEDEGDIAKFKGYQPSASEPSAPPAKETSAPPPPKREVVEESAREPEPKVSKPSAPPSSGDRVFASPLARKLAEEKNVPLSSIKGTGSEGLIVKADIDDFLASGAKEVSAPSKAKVATDAALDYTDIPVSQIRKVTASRLLLSKQTIPHYYLTVDTCVDKLMSLRAKLNSLQEASGGPRISVNDLVIKAAALALRKVPQCNSSWANDYIRQYKNVNINVAVQTDNGLFVPVIRDADKKGLSTIGDEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQSGILAVGSAERRVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01115 578 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 163 578 IPR006257 GO:0004742|GO:0006090|GO:0045254
Pste6g01115 578 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 158 249 - -
Pste6g01115 578 Gene3D - 276 329 IPR036625 GO:0016746
Pste6g01115 578 SUPERFAMILY CoA-dependent acyltransferases 347 578 - -
Pste6g01115 578 ProSiteProfiles Biotinyl/lipoyl domain profile. 140 225 IPR000089 -
Pste6g01115 578 SUPERFAMILY Single hybrid motif 163 243 IPR011053 -
Pste6g01115 578 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 163 578 IPR045257 GO:0006086|GO:0045254
Pste6g01115 578 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 333 576 - -
Pste6g01115 578 MobiDBLite consensus disorder prediction 235 287 - -
Pste6g01115 578 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 288 325 IPR004167 GO:0016746
Pste6g01115 578 Gene3D - 156 250 - -
Pste6g01115 578 MobiDBLite consensus disorder prediction 257 272 - -
Pste6g01115 578 Pfam e3 binding domain 287 321 IPR004167 GO:0016746
Pste6g01115 578 CDD lipoyl_domain 164 223 - -
Pste6g01115 578 Gene3D - 331 576 IPR023213 -
Pste6g01115 578 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 174 203 IPR003016 -
Pste6g01115 578 Pfam Biotin-requiring enzyme 158 223 IPR000089 -
Pste6g01115 578 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 347 578 IPR001078 GO:0016746
Pste6g01115 578 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 281 326 IPR036625 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01115 Pste-Chr6 4629747 4636210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01115 38 578 Acyl Lipid Metabolism Gene Families AT1G54220 64.610 0.0 696