Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01107 atgtcaccttcgtcctctcacgtctggaagtacgatgtgtttgtgagctttagaggatcagatgttcgtaccggtttcctctcacaccttgtgaatggcatctcaacaactggaatcaactctttcattgatgagaagcttgaaaggggagttgtgcccgtgttttacaacgttaatccagaggaagtatgtcatcaaaggggtgagtttggagaaggcttacgtagatgtttacggacagcagtgacatccgatgtgcttaagaattggaggagggcactcaaggaggccgcagacgtgtccggttatcacagcaggatttaccagaatgatgctcagttagtagaaataattgtggaggacattgttcaaaaacttgatatagagttattgcctatcaccggatttccagttgggttaaagtctcgagtgcaacaagtgattgagcttatcaatgctcaatcaggcactggttgtgttgtaggaatctggggaatgggtggtttggccttatgtggaaattgtaaatggattgatgacaaaggaagtgtaatcattgtcacaactagagatttacgcttgcttcatgaacttgaagattatcatgaagtacatatttgtagaataaaggaaatggacgaatatgagtcccttgagcttttcagcaagcatgcttttaaagaaccatatccaacaaaaaattggagtaaactctcaattgatgtagttgcttactgtggaggattaccactagctcttgaagtccttgggtcttacttacgtcggaggacaaaagaagaatggaaaagcgtactgtcaaaactaaagaatattcctaattatcaagttcatgaaaaattaaggataaactttgatggtttagatgatcacacagaaaaggaaatattccttgatatatgttgtttctttgttggtaaaaacagaatctatgttacggacatactaaattgttgtggattatgtgctgatattggaataactatactcataaagcgtagccttagaaaagttgaaaagaaaaataaacttggaatgcatcctttactacgagatatgagaagagagataattcgtgaaagttcacgaaacgaaccatggaagcgtagtcgattgtggtttcaagaggatgttcttgatgtactcacaaataatactggaatagaagctattcagggaataactctaaacttgaatttcaccagcagagattgctttcaagctcacacctttaaagaaatgaagagattgaaactattgcaacttgatcatgtacaactcactggagattatggatatctatcaaagcaactgaaatggatatgttggcaagggtttcatttaaaaaccatccctaacaactttgatatgaaagatgttttgcagcagctaaaaatcctgaatcttagtcattccaagttcttgtctgaaacccctgacttttcaggattaccaagtcttgaaaaactcattctcaaagattgtccaagtttgcacaagaatattgacaaaatagcagaggatatagtgcaaatgaaatctttgacaattcttgttgcagataatactgctgtgaaacaagtgcccttttccattggattggcaactgtacctgaagattattgtcgcatgaagggaatgattttatgtgttgtttattcatcaactcttgacaacacagcaactgaattccttattagtgtcttgatggttaattacacaaagtgcacaatccacaaatacaagcgagacacagtaatttcctttggtaatttagattgggagggcataatttctcattttggatctggagacaaggttgaattttttttgcgttttggacatggattggttgtgaagaagacatgtctctgtctaatctatgataaatcaattgacgtagaaatagagccttctcctgaaccaattaatgagcctgagaaagagcgaactaatgagactgagaaagcgagccttctcctgtatgataaatcaattgatatgggaatagagccttctcctgagccaatcaatgagcctgagcaagagacaattaaagaattagagaaagagccaccaaaagaaccaaagaaagggttagaaaaggagctaaagcacaaacgaaagaaaaatgcctttgtcttatgggttgctaagcaaggtgtgatgcatagaaccatagtagatcatatgtggataacaggtattccaagttctatctacaattttaacagaaaaatatttggtaatacattcacttaa 2280 0.0 MSPSSSHVWKYDVFVSFRGSDVRTGFLSHLVNGISTTGINSFIDEKLERGVVPVFYNVNPEEVCHQRGEFGEGLRRCLRTAVTSDVLKNWRRALKEAADVSGYHSRIYQNDAQLVEIIVEDIVQKLDIELLPITGFPVGLKSRVQQVIELINAQSGTGCVVGIWGMGGLALCGNCKWIDDKGSVIIVTTRDLRLLHELEDYHEVHICRIKEMDEYESLELFSKHAFKEPYPTKNWSKLSIDVVAYCGGLPLALEVLGSYLRRRTKEEWKSVLSKLKNIPNYQVHEKLRINFDGLDDHTEKEIFLDICCFFVGKNRIYVTDILNCCGLCADIGITILIKRSLRKVEKKNKLGMHPLLRDMRREIIRESSRNEPWKRSRLWFQEDVLDVLTNNTGIEAIQGITLNLNFTSRDCFQAHTFKEMKRLKLLQLDHVQLTGDYGYLSKQLKWICWQGFHLKTIPNNFDMKDVLQQLKILNLSHSKFLSETPDFSGLPSLEKLILKDCPSLHKNIDKIAEDIVQMKSLTILVADNTAVKQVPFSIGLATVPEDYCRMKGMILCVVYSSTLDNTATEFLISVLMVNYTKCTIHKYKRDTVISFGNLDWEGIISHFGSGDKVEFFLRFGHGLVVKKTCLCLIYDKSIDVEIEPSPEPINEPEKERTNETEKASLLLYDKSIDMGIEPSPEPINEPEQETIKELEKEPPKEPKKGLEKELKHKRKKNAFVLWVAKQGVMHRTIVDHMWITGIPSSIYNFNRKIFGNTFT 759
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01107 759 Gene3D Ribonuclease Inhibitor 373 546 IPR032675 -
Pste6g01107 759 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 103 IPR035897 -
Pste6g01107 759 MobiDBLite consensus disorder prediction 686 710 - -
Pste6g01107 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 306 IPR027417 -
Pste6g01107 759 Gene3D - 211 295 IPR042197 -
Pste6g01107 759 SUPERFAMILY "Winged helix" DNA-binding domain 283 388 IPR036390 -
Pste6g01107 759 Pfam TIR domain 10 51 IPR000157 GO:0007165
Pste6g01107 759 SUPERFAMILY L domain-like 419 536 - -
Pste6g01107 759 MobiDBLite consensus disorder prediction 676 710 - -
Pste6g01107 759 ProSiteProfiles TIR domain profile. 9 155 IPR000157 GO:0007165
Pste6g01107 759 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 169 IPR044974 GO:0006952
Pste6g01107 759 Gene3D - 4 49 IPR035897 -
Pste6g01107 759 Gene3D - 50 132 IPR035897 -
Pste6g01107 759 Pfam NB-ARC domain 180 277 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste6g01107 Pste-Chr6 4568174 4574133 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01107 170 505 WRKY Transcription Factor Family AT5G45050 28.424 2.46e-30 127