Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01103 ATGATGGTGGAATTAAGTTGCCTTGATATACTTAGCGATCTTAGTCCTATACCATTGTTCAGTGAACTATTCCGAACTGATGGGGAACAAGTGCTTAAGTTTCCACCACCTAAAGTAATTCAAGTGAATCAATCTGGATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGTGTAAATCCTCACATTATCAAAAGACTTGAGGAGTTCCCACCAAAGAGCAAGCTAGATAGCCAAATCTACGGTGATAACACCTGTACAATCACCAGAGAACACTTGGAGCCAAATTTGGGTGGGCTCACTGTAGAACAGGCCATCCAAAACAACAAATTGTTCATACTAGACCACCACGACACACTCATTCCATATTTGAGGCGGATAAACGCAACTGCGACAAAGGCATATGCTACTAGAACCATCCTTTTCTTGCAAGATAACGGAACCTTAAAACCGTTGGCCATTGAGCTAAGTAAACCACATCCTCAGGGTGATAATTATGGTCCTATTAGTAACGTTCATCTTCCAGCGGAACAAGGCGTTGAAGCTTCCATTTGGCTACTTGCTAAGGCTTATGTCATCGTAAATGACTCTTGCTATCACCACTTTGTCGACCCACCGAGGCGTGCATTTGTTGAGGATTCTTCTTCTCCACATGGCCTCCGTCTTTTGATTGAGGACTATCCTTATCTTGCGATGGACTAG 708 0.4294 MMVELSCLDILSDLSPIPLFSELFRTDGEQVLKFPPPKVIQVNQSGWMTDEEFAREMIAGVNPHIIKRLEEFPPKSKLDSQIYGDNTCTITREHLEPNLGGLTVEQAIQNNKLFILDHHDTLIPYLRRINATATKAYATRTILFLQDNGTLKPLAIELSKPHPQGDNYGPISNVHLPAEQGVEASIWLLAKAYVIVNDSCYHHFVDPPRRAFVEDSSSPHGLRLLIEDYPYLAMD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01103 235 PRINTS Plant lipoxygenase signature 32 48 IPR001246 GO:0016491
Pste6g01103 235 PRINTS Plant lipoxygenase signature 137 161 IPR001246 GO:0016491
Pste6g01103 235 PRINTS Plant lipoxygenase signature 71 90 IPR001246 GO:0016491
Pste6g01103 235 SUPERFAMILY Lipoxigenase 8 231 IPR036226 -
Pste6g01103 235 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 235 IPR013819 GO:0016702|GO:0046872
Pste6g01103 235 FunFam Lipoxygenase 46 179 - -
Pste6g01103 235 Pfam Lipoxygenase 17 205 IPR013819 GO:0016702|GO:0046872
Pste6g01103 235 Gene3D - 3 63 IPR027433 -
Pste6g01103 235 Gene3D - 64 198 - -
Pste6g01103 235 PANTHER LIPOXYGENASE 19 205 IPR000907 GO:0016702|GO:0034440|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01103 Pste-Chr6 4539680 4541187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01103 11 205 Acyl Lipid Metabolism Gene Families AT3G22400 60.000 8.94e-80 254