Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01102 ATGCAAACTCGCCAAGAGTTGATTGAGTCATGCACCACCCTCATATGGACTGCTTCAGCCCTTCATGCAGCTGTTAATTTTGGGCAATATCCTTATGGTGGTTACATCCTTAACCGACCAACTCTTAGTAGGCGTTTCATGCCTGAGATAGGATCACACGAGTATGATGAGCTTGCCAAGAGCCCTCGGAGGCATGCTTCTGACGAGTTGTACCTTGGACAGAGAGATGGTGGTGAATTTTGGACTTATGAAAAAGAGCCATTAGAGGCCTTCAAGAGTTTTGGCAAAAAGCTGGCAGAAATTGAGCAAAAACTCATCCAAAGGAACAATGATGAGACTCTGAGGAACCGATATGGCCCTGTGAAGATGCCCTACACATTGCTTTATCCTTCCAGTGAGGAAGGATTAACTTTCAGAGGCATTCCTAACAGTATCTCTATCTAA 444 0.4482 MQTRQELIESCTTLIWTASALHAAVNFGQYPYGGYILNRPTLSRRFMPEIGSHEYDELAKSPRRHASDELYLGQRDGGEFWTYEKEPLEAFKSFGKKLAEIEQKLIQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTFRGIPNSISI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01102 147 Gene3D - 1 146 - -
Pste6g01102 147 SUPERFAMILY Lipoxigenase 1 147 IPR036226 -
Pste6g01102 147 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 147 IPR013819 GO:0016702|GO:0046872
Pste6g01102 147 Pfam Lipoxygenase 1 63 IPR013819 GO:0016702|GO:0046872
Pste6g01102 147 Pfam Lipoxygenase 64 130 IPR013819 GO:0016702|GO:0046872
Pste6g01102 147 PANTHER LIPOXYGENASE 1 147 IPR000907 GO:0016702|GO:0034440|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01102 Pste-Chr6 4539009 4539523 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01102 1 147 Acyl Lipid Metabolism Gene Families AT1G55020 56.725 1.89e-59 195