Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01081 atggttaacgttcctcactatcgcaaaagtaacaaaattgaatccctgaccaaaacgattgtgtataatcgctactgcctcaactccaccaccactatcagtaccgccattgctgacgatggtgcgacaacaacgacgattgtggaggagaaggtgggaacttttatggtggcggtactaataacgatagtgatagtggtagtgatgataatattgatgatggtaacgattatagtgtggctggtagcaacggaggcagtgggagtgacaacggtggtagtggagacgatggtggtgacaccttcctataccattgtcaccaccattttttatgccactattttcattgtcaatgctgctgtcactatggttgctaccatcatcactacaactgtggtcgtcatcagcgacaatgttgatgcaaagcggataattggtaggaatttcagtgatcccgaagttcaaagtgacatgaaactatggccatttaaagttatagccgatgctaatgacaaaccaatgatcactgtggattacaaacgtgaggaaaaacacttttatgcagaacaaatatcatccaaagttttggaaaagatgcgtgagagtgcagagtctttccttggatcaagagtgaaaaatgctgtcatcactgtgcctgcttactttaatgactcccagcgtgaagctactaaaaaagcaggtcatcttgctggcctcaatgtaatgcaaatactcgatgagccccttgctgcagcaattgcatattaccttgaaatgaaagattacaatcatgaaaagaggaatgctcttgtgtttgatcttggcggtggcactttggatgtgtcgcttatcacaattgagaatggcaatatggaagttaaggccactgttggagacagtcactttgggggacaggacttggataacaatatggtgaaatactgtcttgaggagtttcagagaaagaatagaatggacattagtaaaaacccaagaccccttatgaggttgagaacagcttgtgagaatgcaaagaggatgttgtcttccactaataagaccaacattaaggtagactgtttgtataaggatattgatttccacttgtcaataagtcgctctaagtttgaggaactcaacaaagctcactttaacaagtgtataacgtttgtggagaagtgtttgagggatgctaaaatggacaagagtgaagttgatgatgttgtgctggtaggtggatcttcaaggattcccaaagtgcagcaactattaagtgattttttttatgggaaggaattcaacaaacgaatcaaccctcatgaggctgttgcatatggtgctgctgtccaagcttttatattgaatgatgagaaggagaaggctcaaaatggcgtgcctgtgtatgcttctgatagctccggtagcaatgatatgacaagagaattgttgaagaatgataactctggtagcaatgatgtgaccaaaaaattgttgaagaatattgcaaaatttgcattagaggcagcagtttcagcaattacaagtgaccttggtgggatgttgtttgactttatttctagctag 1584 0.0 MVNVPHYRKSNKIESLTKTIVYNRYCLNSTTTISTAIADDGATTTTIVEEKVGTFMVAVLITIVIVVVMIILMMVTIIVWLVATEAVGVTTVVVETMVVTPSYTIVTTIFYATIFIVNAAVTMVATIITTTVVVISDNVDAKRIIGRNFSDPEVQSDMKLWPFKVIADANDKPMITVDYKREEKHFYAEQISSKVLEKMRESAESFLGSRVKNAVITVPAYFNDSQREATKKAGHLAGLNVMQILDEPLAAAIAYYLEMKDYNHEKRNALVFDLGGGTLDVSLITIENGNMEVKATVGDSHFGGQDLDNNMVKYCLEEFQRKNRMDISKNPRPLMRLRTACENAKRMLSSTNKTNIKVDCLYKDIDFHLSISRSKFEELNKAHFNKCITFVEKCLRDAKMDKSEVDDVVLVGGSSRIPKVQQLLSDFFYGKEFNKRINPHEAVAYGAAVQAFILNDEKEKAQNGVPVYASDSSGSNDMTRELLKNDNSGSNDVTKKLLKNIAKFALEAAVSAITSDLGGMLFDFISS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01081 527 Gene3D - 113 451 - -
Pste6g01081 527 Gene3D - 133 194 - -
Pste6g01081 527 Gene3D Actin; Chain A, domain 4 303 386 - -
Pste6g01081 527 ProSitePatterns Heat shock hsp70 proteins family signature 2. 271 284 IPR018181 -
Pste6g01081 527 Pfam Hsp70 protein 139 459 IPR013126 GO:0005524|GO:0140662
Pste6g01081 527 ProSitePatterns Heat shock hsp70 proteins family signature 3. 408 422 IPR018181 -
Pste6g01081 527 Gene3D - 260 434 - -
Pste6g01081 527 FunFam heat shock 70 kDa protein-like 139 194 - -
Pste6g01081 527 MobiDBLite consensus disorder prediction 466 487 - -
Pste6g01081 527 FunFam heat shock 70 kDa protein 14 303 386 - -
Pste6g01081 527 SUPERFAMILY Actin-like ATPase domain 139 259 IPR043129 -
Pste6g01081 527 PRINTS 70kDa heat shock protein signature 35 48 - -
Pste6g01081 527 PRINTS 70kDa heat shock protein signature 405 421 - -
Pste6g01081 527 PRINTS 70kDa heat shock protein signature 437 457 - -
Pste6g01081 527 PANTHER HEAT SHOCK PROTEIN 70KDA 97 462 IPR013126 GO:0005524|GO:0140662
Pste6g01081 527 SUPERFAMILY Actin-like ATPase domain 266 454 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01081 Pste-Chr6 4452890 4455450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01081 100 457 Calmodulin-binding Proteins AT5G02500 62.849 1.02e-151 442