Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01079 atggcaacaaatgcagagacacttgctataggaatcgatttaggaaccacaaactcgtgcgttgcagtgtggcgacatggacaagtggagataatcgtgaatgataaagggaacagaacaacaccggcttgtgttgccttcggcttcaataacacctccactaccattggtgaagctgctaagaatcaagctgcttccaacgcaatcagcactgtcactggtaaaattaaatccctacacctattttga 249 0.0 MATNAETLAIGIDLGTTNSCVAVWRHGQVEIIVNDKGNRTTPACVAFGFNNTSTTIGEAAKNQAASNAISTVTGKIKSLHLF 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01079 82 SUPERFAMILY Actin-like ATPase domain 8 73 IPR043129 -
Pste6g01079 82 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pste6g01079 82 Gene3D - 1 80 - -
Pste6g01079 82 PANTHER HEAT SHOCK PROTEIN 70KDA 9 72 IPR013126 GO:0005524|GO:0140662
Pste6g01079 82 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Pste6g01079 82 FunFam heat shock 70 kDa protein-like 3 80 - -
Pste6g01079 82 PRINTS 70kDa heat shock protein signature 8 21 - -
Pste6g01079 82 PRINTS 70kDa heat shock protein signature 36 48 - -
Pste6g01079 82 PRINTS 70kDa heat shock protein signature 60 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01079 Pste-Chr6 4443860 4444464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01079 1 72 Calmodulin-binding Proteins AT3G09440 62.500 1.85e-22 87.4