Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01076 ATGACGCGGGGAAGGATAAGGGCGAAGCTCCGGAGGAGCCATCTTTACACATTTGGTTGCCTTAAGCCTTCTACCACTGAGGAGGCACCTCATCCACTTCAAGGTCCCGGGTTCTCGCGAACAGTGTATTGCAACCAGCCTCTACTCCATGACAAGAAGCCTCTATTTTACTCTAAGAATGACATATCCACGACCAAGTACAATGTTGTTACGTTTTTCCCCAAGGCACTCTTTGAACAATTTCGCAGGGTTGCTAATATATACTTTCTTTTGGCTGCGTGTTTGTCAGCATCTCCAATTTCGCCTTTCAGCCCGCTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCACGCAGGTTCCTTCAGGATGTGAAAGTTAATCGTCGGAAGGTTGATCGCCATAAAGGTGAAGGTGCTTTTGGTCCCAAGTCGTGGCAGAACATTATGGTTGGGGATGTGTTAAAAGTGAAGAAAGATCAATTTTTTCCAGCTGATTTGCTTTTCTTGTCATCGAGTTATGAGGATGGGATATGCTATGTGGAGACTATGAATTTAGATGGCGAGACCAACTTGAAGGTAAAAAGATCTTTGGAGGCTACCTTGAATCTTGATAATGATGAAGTTTTTAAAGACTTCAATGGAACAATACGTTGTGAAGACCCCAACCCCAATCTTTATACGTTTGTTGGAAACCTTGAGTATGAGCGCCAAATTTATCCTCTTGATCCTAGTCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGATCACATTTATGGGGTGGCCATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGGAGCACAATAGAAAAAAAGATGGATTATATCATATACACCCTCTTCACTGTCCTTATTTTGATATCTGTGATTAGTTCCATAGGATTTGTCTTCAAGACTAAGTTTCAAACCCCACAGTGGTGGTATTTACGGCCAGACAATATTGAGTATCAGTATGATCCTAAGAAAGTTGGATTGGCTGGAATGAGTCATCTGATTACCGCGCTCATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATTGAGGTTGTAAAGGTTTTACAGGCAACCTTCATCAACCAAGACATTCAAATGTATGATGAAGAAACCGGGACTCCAGCGGATGCACGAACATCAAATTTGAATGAAGAGTTGGGTCAAGTAGATACTATTCTGTCAGATAAAACTGGAACTTTGACCTGTAATCAAATGGACTTTTTGAAGTGCTCTATCGCAGGTACTGCATATGGTGTGCGCCCCAGTGAAGTTGAACTTGCCGCAGCAAAGCAGATGGCTTCTGATCTTGCGGACCAGGATTCAGATCTCTCCAATTTCCCCATGACTAACACTAAAGTGCGAGTTTCATGGGATAATGTAAGAGCTGAAGAAATTGAACTTGAGACCGTTGTTACTTCCAAAGGAGATGAGGATCAAAGCCAAAGGCATGCCATAAAGGGATTTGCTTTTGAAGATGACCGCCTTATGAACTGTAATTGGTTGAAAGAGCCAAATGCAGATGACCTTTTAATGTTCTTCCGAATATTAGCAGTTTGCCACACTGCCATTCCTGAGTTGAATGAGGAGACTGGCGTTTTTACATATGAAGCTGAGTCTCCTGATGAAGGGTCTTTTCTTGTAGCAGCAAGAGAATTTGGCTTCGAGTTTTGCAAAAGGACTCAGTCAAGTGTTTTCATTCGTGAAAGATTTTCTGCTTCTGGCCAAGTGGTTGAAAGAGAGTACAAACTTTTGAATCTTCTGGATTTCACTAGTAAAAGAAAGCGAATGTCAGTGATTGTGCGTGATGAGGAGGGCAGTCTTTTTCTTTTGTGCAAAGGGGCTGACAGTATCATATTTGACCGAATGTCAAAGAATGGAAAAATGTATTTGGAGGCTACTACCAAACATTTAAATGAATATGGAGAAGCTGGTTTAAGAACACTAGCCTTGGCTTATAGAAAGCTTGATGAACAAGAATATGCTGCTTGGAACAATGAATTTCAGAAAGCCAAAGCATCTGTTGGGGCTGACAGAGATTCAATGCTTGAGCGGATATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAATTGCAGAAAGGGGTGCCCCAATGTATTGATAATCTGGCTCTGGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGATTTTCTTGCAGTTTGCTTCGACAGGGAATGAAACAGATCTGCATAACTACTCCTGTTTCAGATTCTGTAGCCAGTGATGTCAAACAGGCCATCAAGGATAACATTTTAAATCAACTTACCAATGCTTCCCAAATGATAAAACTGGAGAAGGATCCGCATGCTGCATTTGCATTAATTATCGATGGGAAAACTCTTACATATACTTTAGAAGATGATATGAAACACCAATTTTTGGGATTGGCTGTTGATTGTGCTTCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGATTAGTGAAACAAGGTACTGGAAAGACTACACTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGCTTGCAACTTCATTTCAGGCAGTGATGGCTAGTGACTTTGCGATTGCTCAATTTCGATTTTTGGAGAGACTCCTGGTAGTCCACGGACATTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAGAATATAGCATTTGGGCTCACCATCTTCTATTTTGAGGCCTTCACTGGCTTCTCTGGTCAATCGGTTTATGATGACTGGTACATGATATTGTTTAATGTTGTTTTGACATCATTGCCTGTTATTTCACTCGGTGTTTTCGAACAAGATGTTCCGTCAGAAGTTTGTTTACAGTTTCCTGCACTATATCAACAAGGGCCCAAGAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTATATTGCTCCCTAATCATCTTCTTCCTCATGGTCACCATCTTCTACGACCAAGCATTTCGTGCTGATGGTCAGGTAGCTGACATGGCTGTTGTTGGGACGACTATGTTCACTTGCATCATCTGGGCTGTTAACTGTCAGATTGCACTTACGATGAGTCACTTCACATGGATTCAACACCTGTTTGTATGGGGCAGCATAGCCACTTGGTACATCTTTCTTGTCTTGTATGGAATGATTTCTCCGGAGTATTCCAAGAGTGCCTACCAAATACTGGCTGAAGCTCTGGGTCCTGCACCTATTTATTGGACAGCAACCCTTCTAGTTACTGTTACATGCAATCTTCCTTATTTCGCCCACATATCTTTCCAAAGATGTTTCAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGATATTGAAGATCAACACATGTGGACAAGGGAGCGTTCTAAAGCCAGACAGGAAACTAAGATTGGCTTCACGGCAAGAGTGGAAGCAAAGATCAGACAACTTAAGGGAAGGCTTCAGAAGAAGCAATCTACCTTGGCTATTTCTTCCCCATCGTGACATTATATACATAATTCAACAATTTTGAGTACTTTTAGGGTTGATTATATTGATTGATTAGGTGGGGTTGGGTGAATTAAAGTCCCATTCAT 3788 0.4145 MTRGRIRAKLRRSHLYTFGCLKPSTTEEAPHPLQGPGFSRTVYCNQPLLHDKKPLFYSKNDISTTKYNVVTFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKVDRHKGEGAFGPKSWQNIMVGDVLKVKKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEATLNLDNDEVFKDFNGTIRCEDPNPNLYTFVGNLEYERQIYPLDPSQILLRDSKLRNTDHIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFVFKTKFQTPQWWYLRPDNIEYQYDPKKVGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRPSEVELAAAKQMASDLADQDSDLSNFPMTNTKVRVSWDNVRAEEIELETVVTSKGDEDQSQRHAIKGFAFEDDRLMNCNWLKEPNADDLLMFFRILAVCHTAIPELNEETGVFTYEAESPDEGSFLVAAREFGFEFCKRTQSSVFIRERFSASGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSLFLLCKGADSIIFDRMSKNGKMYLEATTKHLNEYGEAGLRTLALAYRKLDEQEYAAWNNEFQKAKASVGADRDSMLERISDMMEKELILVGATAVEDKLQKGVPQCIDNLALAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTPVSDSVASDVKQAIKDNILNQLTNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKQGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQLATSFQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYCSLIIFFLMVTIFYDQAFRADGQVADMAVVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIATWYIFLVLYGMISPEYSKSAYQILAEALGPAPIYWTATLLVTVTCNLPYFAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSTLAISSPS 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01076 1231 SFLD C1.7: P-type atpase like 405 939 - -
Pste6g01076 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1166 IPR032630 -
Pste6g01076 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Pste6g01076 1231 SUPERFAMILY Calcium ATPase, transduction domain A 149 286 IPR008250 -
Pste6g01076 1231 NCBIfam HAD-IC family P-type ATPase 854 969 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g01076 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1162 IPR023298 -
Pste6g01076 1231 Gene3D - 721 928 IPR023214 -
Pste6g01076 1231 FunFam Phospholipid-transporting ATPase 592 723 - -
Pste6g01076 1231 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Pste6g01076 1231 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Pste6g01076 1231 Pfam Cation transport ATPase (P-type) 547 652 - -
Pste6g01076 1231 NCBIfam phospholipid-translocating P-type ATPase 57 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pste6g01076 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1190 - -
Pste6g01076 1231 FunFam Phospholipid-transporting ATPase 118 288 - -
Pste6g01076 1231 SUPERFAMILY HAD-like 417 943 IPR036412 -
Pste6g01076 1231 Gene3D - 116 288 - -
Pste6g01076 1231 SFLD p-type atpase 405 939 IPR044492 -
Pste6g01076 1231 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Pste6g01076 1231 Gene3D - 593 701 IPR023299 GO:0000166
Pste6g01076 1231 FunFam Phospholipid-transporting ATPase 725 928 - -
Pste6g01076 1231 Coils Coil 1204 1224 - -
Pste6g01076 1231 CDD P-type_ATPase_APLT_Dnf-like 60 1047 - -
Pste6g01076 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 686 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01076 Pste-Chr6 4417047 4423195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01076 1 1226 Primary Pumps ATPases AT1G17500 75.469 0.0 1948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03519 3 27672357 27679507 Pste6g01076 6 4417047 4423195 PCT