Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01075 TTCGCGTTTTACATAATTGTTGACAAACCTGTGAGAAGAGAAGAACTCATGAATATGTTTGAAAAGCACGGGGCTGCTAAGCAAGCAACAAAAAGAGGTTCTGCATTTGCTAGCAACAGAAAGAACTGGGTTTTCCCAGTTGTCTCAGTTTGTTGTGCTCTCATTGCCATTGCACATTTTAGCAACGGCTTGAAGATGTCGAATCAGCAGAGCAGGTCAGCTTCTATTTTCAGAGCTTTTGTATGGCTTTCTTTAGCAGTTTCATTGCATGTTCAGAGAAACAAATGGATCAAAATTTTAAACTCTATCTGGTGGTCATCTTCCTGTGTATTGGCTTCAGCTCTCAACATTGAAACTATGTTCAAAGAGCATGCAGTTGAACTTTTTGAAATGGTACAATGGCTTGTACATTTCTTACTTCTCTTTTGCGCCTTCCAAAATCTCAGTTTTGTCACATGCCATAGTATCCAAGATACAAGTTTATCTGAGCCTCTGACAGCTCAGAGAGTTGAAACTACACAAACACAACTAGGCCATGCTACGCTTCTCAGTAAGTTGACTTTCTCTTGGGTTAATTCTTTACTCAGACTGGGTTACTCAAAGCCACTAGCTCTTGAAGATATCCCATCTCTTCTTCCTGAAGATGAAGCGGACTCAGCCTACCAAGACTTCATGCTTGCATGGGAATCCCTTGTAAGGGAAAACAGCAGTAACAACAACAAAAACTTGGTTCTTTGGTCTGTAGCAAGAACTTTCTCAAAGGAGAACATATTAATAGCATTTTATGCATTACTCAGAAGTATTTGCATGATAATTTCTCCTCTATTACTCTATGCTTTTGTAAACTACTCAAATAGCACCGAGGCAGATCTAAAAGAAGGTTTTTCCATACTGGGTTTTATGATTCTCAACAAAGTGGTTGAGTCTCTGTGCCAGAGGCATTATAATTTTGGCTCAAGGAGGTCAGGAATGAGAATTAGATCAGCTCTGATGGTGGCAGTTTATCAGAAACTGCTAAAGCTTTCAAGTTCAGCAAGGAGAAGGCACTCAACTGGAGAAGTTGTGAATTACATTGCAGTTGATGCGTATCGATTGGGAGAATTTCCATGGTGGTTTCATATAACATGGACTTCTGCAGTGCAACTTGTTTTGTCCATTGTTCTCCTTTTTGGTGTTGTGGGTTCTGGTGCTCTTCCAGGTTTAGTTCCTCTTCTCATCTGTGGATTTCTCAATGTACCATTTGCAAAGTTCATACAAAATTGTCAGTCAGAATTCATGAAGGCACAAGATGAGCGTCTAAGATCAACTTCAGAAATTCTAAATAGTATGAAAATCATTAAGTTACAATCCTGGGAAGATAAATTCAAGAACTTAGTTTTGTCCCTACGTGCTAAAGAATTCGTTTGGTTGTGTAAGGCACAAGTCTTAAAAGCTTATGGGTCATTTCTGTATTGGATGACTCCTACCATCGTTCCTTCAGTTGTTTTCCTCGGATGTGTTCTTTTCGATAGTGCCCCATTGAATGCTGGAACCATTTTCACTGTTCTTACAACATTGAGGATAATGGGAGAACCTGTTCAGTTGATCCCAGAGGCTCTATCTACTGTGATCCAAGTTAAGGTCTCCTTTGATCGTCTCAATACCTTTTTGCAAGATGAAGAGTTAGATAGTATTAATGATTATGGAAGAAATGTAAAGCAAAATTCACTTAATGCAGTGGAAATCCAAGCTGGCAACTTCATTTGGGATAACGAATCAGTGTCCCCAACTTTAAGAGATGTGAATTTAGAAATCAAATGGGGACATAAAATTGCAGTTTGTGGGCCAGTTGGAGCTGGAAAATCATCTCTTTTGTATGCAGTCCTAGGAGAGATTCCCAAGATCTTAGGAACTGTAAATGTGTCTGGCAGCATAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCGAGATAATATACTCTTTGGCAAGGCAATGGACAAACCAAAATATGAGAATGCCATTAAAGTTTGTGCTTTGGATAAGGATATTAATGATTTTAGCCATGGTGATCTTACTGAAATAGGCCAACGAGGGATTAACATGAGTGGAGGACAGAGGCAAAGAATTCAACTAGCTCGAGCAGTTTACAATAATGCAGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCACACACTGCAGTTATTCTGTTTAATGACTGTGTCATGTCTGCTCTAAGAGATAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACAATCCTGGTAATGAAGGATGGAAAAGTTACTCAATCGGGTAGTTATGACGATCTCCTCACAGATGGCACCGCCTTTGAGCAACTTGTGAATGCCCATAAAACTGCATTAACAGGACTGGATCAAAAAGATGAAAATAATATACACTCTGATATTGAAGTTATGGTAACTCCCGAAAAGTCTGAACGTTTTAAGCTCACTAAAAATCAAACTGAGGGGGTGATTTCTACCAAAAGTCAGCCTGGTGTACAGCTGACACAAGAAGAAGAAAGGGAGATAGGTGATTTTGGATGGAAGCCGTTCTGGGATTATATTTCATTTTCCAAGGGGTCATTCTTGCTGTGTTCAACCATGTTAGCACAATTTGCTTTTATTGCTTTGCAGACTGCATCAACCTATTGGCTTGCCCTAGCCATTGAAATTCCAAAAGTAACTAGTGGCACTTTGATTGGAGTTTACTCGTTATTTTCAATTCTTAGTGCTGTATTTATATACATAAGGCCTCTCCTGGCTGCTAATCTTGGATTAAAAGCTTCTAAAGTCTTCTTCTCAAGTTTCACTTCAGCTATCTTCAATGCTCCTATGTTGTTCTTTGACTCAACCCCTGTAGGAAGGATTTTAACCCGAGCTTCATCAGATTTGAGTATTTTGGACCTTGATATTCCTTATACTCTCACTTTAGTGGCATTTGTAGCAGTTGAAATCCTAGTGACAATATGTGCAATGGTTTCAGTCACATGGCAAGTTCTTATTGTAGCGGTTCCTGCTACAGTAGCATCAGTATATATTCAGGGATATTATCAAGCCTCTGCAAGGGAATTGATAAGGATCAACGGAACCACAAAAGCTCCAGTCATGAATTTTGCTGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGGTGGACAGATTTTTCAACAACTACCTAAAGCTTGTGGACAGGGATGCAACGTTGTTCTTTCACTCTAATGTAACCATGGAATGGTCAATTTTAAGAATTGAAGTACTTCAAAATTTGATAGTCTTCACTGCTGCTTTATTACTTATTCTACTTCCCGAGGGATATGTACCATCAGGTCTTGTGGGGTTATCTCTTTCTTATGCATTCACATTGAAAGAATCCCAAGTATTTTGGAGTCGAATGTTTAGCATGTTATCAAACCATATCATCTCAGTTGAAAGAATCATGCAATTCATTCACATACCAGCAGAGCCTCCTGCAATTGTGGTGGATAACAGACCTCCATTTTCATGGCCTTCCAAGGGTAGGATTGATCTTCGAGCCCTAGAGATTAGATATCGTCGAAACGCTCCATTAGTTCTTAAGGGTATAAATTGCACGTTTAAAGGGGGGAAAAGAGTGGGAGTTGTAGGAAGGACAGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGTTTAGTTGAACCTTCAGGAGGTGATATTCTAATAGATGGGATTAATATATGCTCAATGGGATTAAAAGATTTGAGAATGAAACTCGGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGGAGCATTAGGACCAACTTGGACCCTCTAGGCTTCTATGATGATGATGAAATATGGAAGGCTTTAGAAAAATGTCAGCTAAAGGAAGCAATCAGCAAGCTACCAGCTCTCTTGGACTCTTCTGTAAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAGTTGTTTTGTCTTGGAAGAGTGCTACTTAAGAGGAACAGAATACTTGTTCTAGACGAAGCTACTGCGTCCATTGACTCTGCAACAGATGTCATTCTACAACAAGTGATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGAGAACTAGTGGAATATGATGAGCCTTCAAAACTTATGGGGACCAACTCTTGGTTCTCTAAGTTGGTTGCTGAATATTGGTCAAGCCACAGGAAGAATTCCTCCCCGAATATTAGCAAGCAGCAACTTTGA 4335 0.3975 FAFYIIVDKPVRREELMNMFEKHGAAKQATKRGSAFASNRKNWVFPVVSVCCALIAIAHFSNGLKMSNQQSRSASIFRAFVWLSLAVSLHVQRNKWIKILNSIWWSSSCVLASALNIETMFKEHAVELFEMVQWLVHFLLLFCAFQNLSFVTCHSIQDTSLSEPLTAQRVETTQTQLGHATLLSKLTFSWVNSLLRLGYSKPLALEDIPSLLPEDEADSAYQDFMLAWESLVRENSSNNNKNLVLWSVARTFSKENILIAFYALLRSICMIISPLLLYAFVNYSNSTEADLKEGFSILGFMILNKVVESLCQRHYNFGSRRSGMRIRSALMVAVYQKLLKLSSSARRRHSTGEVVNYIAVDAYRLGEFPWWFHITWTSAVQLVLSIVLLFGVVGSGALPGLVPLLICGFLNVPFAKFIQNCQSEFMKAQDERLRSTSEILNSMKIIKLQSWEDKFKNLVLSLRAKEFVWLCKAQVLKAYGSFLYWMTPTIVPSVVFLGCVLFDSAPLNAGTIFTVLTTLRIMGEPVQLIPEALSTVIQVKVSFDRLNTFLQDEELDSINDYGRNVKQNSLNAVEIQAGNFIWDNESVSPTLRDVNLEIKWGHKIAVCGPVGAGKSSLLYAVLGEIPKILGTVNVSGSIAYVSQTSWIQSGTVRDNILFGKAMDKPKYENAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQRQRIQLARAVYNNADIYLLDDPFSAVDAHTAVILFNDCVMSALRDKTVILVTHQVEFLSEVDTILVMKDGKVTQSGSYDDLLTDGTAFEQLVNAHKTALTGLDQKDENNIHSDIEVMVTPEKSERFKLTKNQTEGVISTKSQPGVQLTQEEEREIGDFGWKPFWDYISFSKGSFLLCSTMLAQFAFIALQTASTYWLALAIEIPKVTSGTLIGVYSLFSILSAVFIYIRPLLAANLGLKASKVFFSSFTSAIFNAPMLFFDSTPVGRILTRASSDLSILDLDIPYTLTLVAFVAVEILVTICAMVSVTWQVLIVAVPATVASVYIQGYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFNNYLKLVDRDATLFFHSNVTMEWSILRIEVLQNLIVFTAALLLILLPEGYVPSGLVGLSLSYAFTLKESQVFWSRMFSMLSNHIISVERIMQFIHIPAEPPAIVVDNRPPFSWPSKGRIDLRALEIRYRRNAPLVLKGINCTFKGGKRVGVVGRTGSGKTTLISALFRLVEPSGGDILIDGINICSMGLKDLRMKLGIIPQEPTLFKGSIRTNLDPLGFYDDDEIWKALEKCQLKEAISKLPALLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDVILQQVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGELVEYDEPSKLMGTNSWFSKLVAEYWSSHRKNSSPNISKQQL 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01075 1444 ProSitePatterns ABC transporters family signature. 698 712 IPR017871 GO:0005524|GO:0016887
Pste6g01075 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 571 796 IPR027417 -
Pste6g01075 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1181 1425 IPR027417 -
Pste6g01075 1444 CDD ABCC_MRP_domain2 1190 1410 - -
Pste6g01075 1444 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 179 1430 - -
Pste6g01075 1444 Pfam ABC transporter 591 725 IPR003439 GO:0005524
Pste6g01075 1444 SUPERFAMILY ABC transporter transmembrane region 245 552 IPR036640 GO:0005524|GO:0016020
Pste6g01075 1444 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 882 1155 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01075 1444 FunFam Multidrug resistance protein associated1 551 816 - -
Pste6g01075 1444 CDD ABCC_MRP_domain1 573 773 - -
Pste6g01075 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1194 1426 IPR003439 GO:0005524
Pste6g01075 1444 Pfam ABC transporter transmembrane region 257 522 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01075 1444 Pfam ABC transporter transmembrane region 882 1119 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01075 1444 SUPERFAMILY ABC transporter transmembrane region 863 1174 IPR036640 GO:0005524|GO:0016020
Pste6g01075 1444 FunFam ABC transporter C family member 5 841 1173 - -
Pste6g01075 1444 FunFam ABC transporter C family member 10 240 554 - -
Pste6g01075 1444 Gene3D - 1176 1426 IPR027417 -
Pste6g01075 1444 SMART AAA_5 600 773 IPR003593 GO:0016887
Pste6g01075 1444 SMART AAA_5 1218 1403 IPR003593 GO:0016887
Pste6g01075 1444 CDD ABC_6TM_ABCC_D1 258 546 IPR044746 GO:0140359
Pste6g01075 1444 Pfam ABC transporter 1209 1357 IPR003439 GO:0005524
Pste6g01075 1444 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 257 538 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01075 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 575 796 IPR003439 GO:0005524
Pste6g01075 1444 Gene3D - 580 822 IPR027417 -
Pste6g01075 1444 Gene3D ABC transporter type 1, transmembrane domain 841 1173 IPR036640 GO:0005524|GO:0016020
Pste6g01075 1444 Gene3D ABC transporter type 1, transmembrane domain 233 554 IPR036640 GO:0005524|GO:0016020
Pste6g01075 1444 CDD ABC_6TM_ABCC_D2 874 1167 IPR044726 GO:0140359
Pste6g01075 1444 FunFam ABC transporter C family member 3 1175 1426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01075 Pste-Chr6 4408092 4414665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01075 558 898 Calmodulin-binding Proteins AT2G36910 23.514 3.71e-22 102