Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01064 AACATCAACTTTCACTTGCTGTTTCCACCTCGTCCTTTGCCAAAACCGTGTTCTTTTCTTAAATGGGTGGTTCAGGAAGATGGCTTAAGTCGCTCATCTCTCTCAGAAAGCCCTTCACAACTGATCAAGAGAAGGGTGGTGATAAGAGTAAGAGAAAATGGAAGCTATGGAGGAGCAGTTTAGAAGGTTTTGGGATTGGGTCATCCATGCAGAAGGGACAGATTGGTGGTGGTGGTGGTTCCTTTGTGGTGGATGATGGAGCATTTGCCGCTGCTTTGGCTGCTGTGGTAAGAACTCCACTCAAAGACTTCATGGTCATCAAACAGGAATGGGCTGCCATTCGAATCCAGGCAGTGTTTCGAGGTATCTTGGCAAGACGAGCGTTGAGGGCCCTAAGGGCAGTGGTGAGATTGCAAGCTATATTTCGTGGTTGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTGAAGGCAAGGAATGTGGGGAAGTCTCAAGAAGGGAACGCTGTGAGTGGGCATTGCAATGAAGCTGATCCTGTTAAGCAAGCTGAGGTATCATATGTTTTTCAGCATTTGCCTCAACATCGTCAACTGTGGTGTGACATTCCAGTAACTGCAAAAGAAGTTAAGGCAAAATTACAAACGAGACAAGAAGGAGCAGTTAAGAGGGATAGAGCAAAGAGGACAGGGAGTGCGAGTCCAAACTCAAGAGCTGCTAAGTCGGTGATTCCTCTCAAGAACCGGAACCTAGACAGCAAGAGGTCAGGATGGAGCATGTTAGATCGGTGGATGGCTGCAAGGCCATGGGAGAGCAGGTCCATGGTAGAGATGTATTTGGACTCACCTGACACGACTCTGGTGGCCAGTAAAAGTGATAATCTTGTTCTTCCCTTTAAGTCAGATAAACAAACTGGCTCGGTCAAAGCACGAAGGAATGGCGTGACAACCAGGATTTCAACTAAATCTCTTACAACCAGTCAATCAACTCCATCTTCTTCAGCCATAAGCTCTGAATGCATGTATGATGATAGTCCCATGTCAACTTCATGCGCATCTAGATCACCATCTCGGCCATCTAGCAACAATGTTCTGGTGAAAGCAGCAGATGAAAGAAATGTTTGTAAACCAAGCTACATGAATCTGACAGCATCAACCAAAGCTAAACTGAAATCCTATAGGTGTTTTTCTCAGAATTCAAAGAGAAACTTTATGGACGATTGTGTGTCTTTAAGTGGAGTTACTAGAAGCAGTTCTGGTTCCAATCCTTGTGCTAATACATGGAAGAATCTCTATGCAACACCTCTAAGAACAAGTTATCACAAACGATTTTCATTGGAAAATAAGTAATTGCTTTGCCACGAAAATAGCTGGAATGTTCTACTTCTATAAGCCCAACAGCTTGTTGTTCAGTTTTACCTCAATGTCGGCGGATGAATGTGCCGACAAATTCACTGATAATTGCTAATTGATAGTGTAGATAACAAAAGTGGTTTGCAGTGAAGATGAAAAACACAGTTACAATTTGTAAGGTGTGTTTTTACTGCAGTTTATAATCAGTTTGTCTTTATTTTTTTTATATATTCATGTTGATTTTTGGGAGGAACATTTATAATGATGTAACTCTAAGTTGTACCGTCTGAAAGATACTCTTTAAGACACACGGTTCTGACTTTAAAAATTTGTATGAAACATACATGCGTGGATGCATGATTATATGTTAAATACAAAGGCAAGTGTTTGCATGAGGAATGAAACACCG 1794 0.4242 MGGSGRWLKSLISLRKPFTTDQEKGGDKSKRKWKLWRSSLEGFGIGSSMQKGQIGGGGGSFVVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGILARRALRALRAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGKSQEGNAVSGHCNEADPVKQAEVSYVFQHLPQHRQLWCDIPVTAKEVKAKLQTRQEGAVKRDRAKRTGSASPNSRAAKSVIPLKNRNLDSKRSGWSMLDRWMAARPWESRSMVEMYLDSPDTTLVASKSDNLVLPFKSDKQTGSVKARRNGVTTRISTKSLTTSQSTPSSSAISSECMYDDSPMSTSCASRSPSRPSSNNVLVKAADERNVCKPSYMNLTASTKAKLKSYRCFSQNSKRNFMDDCVSLSGVTRSSSGSNPCANTWKNLYATPLRTSYHKRFSLENK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01064 439 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Pste6g01064 439 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Pste6g01064 439 SMART iq_5 87 109 IPR000048 GO:0005515
Pste6g01064 439 SMART iq_5 110 131 IPR000048 GO:0005515
Pste6g01064 439 Gene3D - 86 139 - -
Pste6g01064 439 MobiDBLite consensus disorder prediction 205 233 - -
Pste6g01064 439 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Pste6g01064 439 MobiDBLite consensus disorder prediction 205 221 - -
Pste6g01064 439 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Pste6g01064 439 MobiDBLite consensus disorder prediction 298 329 - -
Pste6g01064 439 MobiDBLite consensus disorder prediction 293 329 - -
Pste6g01064 439 PANTHER IQ-DOMAIN 5-RELATED 1 413 - -
Pste6g01064 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01064 Pste-Chr6 4342820 4345583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01064 1 431 IQD Protein Family AT1G72670 42.699 1.82e-80 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03530 3 27744769 27747073 Pste6g01064 6 4342820 4345583 PCT