Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01049 CTGCAGAAGAAGGAGGCAGCCATGGTTCTGAAAACTGAATTATGCCGATTCAGTGGTGGCAAGATCTACCCAGGAAAAGGCATCAGATTTGTTCGTTCTGATTCTCAGGTCTTCCTCTTTGCAAACTCAAAATGTAAGAGGTATTTCCACAACCGCTTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGAAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGCCGTGCCACTAAAAAGCCTTATTCTAGGTCCATTGTTGGTGCCACTTTGGAAGTTATACAAAAGAAGAGAGCTGAAAAGCCAGAAGTTCGAGATGCTGCTCGGGAAGCTGCCCTTCGTGAAATTAAAGAGAGAATCAAGAAAACGAAGGACGAGAAGAAGGCAAAGAAAGCAGAAGTTGCAGCTAAGTCACAAAAATCACAAGGGAAAGGAAATGTTTCAAAGGGTGCCGTGCCCAAAGGTCCCAAACTTGGTGGTGGTGGCGGGAAACGTTGAGTTTTGTTTTGTTCTTAATTTTGCCACCAACCATTTGAATAGACTTGTTTTGCAACTAATATAATATTTTTATTTTGCTGTTTTATTAAACCTGTGTTTGGAGCTTCAGAAAGTATTTTGGTTATCGAAGTATTTTTGCCATATCTTACTCCTTTAGATTGTTTCTGTTGGTTCATTTTTTGGTTGGGATGTTGACTAATCGGAAATGAAACACTAAATCCTGCGTTTGCACATGTTTTGCATTCGAAGCATTGGCTAAAAATTGATTTGATTCCCAAATTTGCTTTTGACCTAACGCAACAATGGTGCTTTTACTTAGAACACCCTAAAGTACGTATATTTTCGTTCAATAGTGATCTTTTGTATATTAGCCC 890 0.4034 LQKKEAAMVLKTELCRFSGGKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAAKSQKSQGKGNVSKGAVPKGPKLGGGGGKR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01049 171 FunFam 60S ribosomal protein L24 10 71 - -
Pste6g01049 171 CDD Ribosomal_L24e_L24 10 63 IPR000988 -
Pste6g01049 171 PANTHER 60S RIBOSOMAL PROTEIN L24 11 165 IPR000988 -
Pste6g01049 171 MobiDBLite consensus disorder prediction 125 143 - -
Pste6g01049 171 Gene3D - 76 147 - -
Pste6g01049 171 ProSitePatterns Ribosomal protein L24e signature. 17 34 IPR023442 -
Pste6g01049 171 Pfam Ribosomal protein L24e 11 74 IPR000988 -
Pste6g01049 171 MobiDBLite consensus disorder prediction 125 171 - -
Pste6g01049 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 65 - -
Pste6g01049 171 SMART 4TRASH 15 53 IPR011017 -
Pste6g01049 171 Coils Coil 119 146 - -
Pste6g01049 171 Gene3D Ribosomal protein L24e 10 71 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01049 Pste-Chr6 4287689 4289165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01049 8 164 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 87.261 5.29e-90 258