Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01046 ATGGCACTTTTGTATAGGAGCACAGACTTTGTTAATTGGCTTCAACTTCAACACCCTTTACATTCTATCCAAGCCACTGGAATGTGGGAGTGCCCTGATTTTTTTCCCGTTTTCAATAATAGCCAAGTTAATGTTGATTATGTTAGGCACGTGCCCAAAGCTAGCTTGAGTGACAAACAACATTATTACTATTTGATTGGGAGTTACAATGCTGCCAAAAATCTCTTTTTCCCGGATAAAGGATTTGTTTTAAGATATGATTATGGAAAACTCTATGCCTCAAAAACCTTCTTTGACTATGCTAAAAGGAGAAGGATTTTGCTTGCCTGGGTTAACGAATCATCAAGCCGTGCCGATAACATAAACAAAGGATTGTCTGGAATCTATACTGATATGACCACCTATGGAACTTTTGTGGACATGGACCCTCTTCATGAGAAGCTATCATTAAGAACCTTGATTGATCATTCTGTTGTAGAGAGTTTCGGAGGAGAAGGAAGGGCTTGCATCACAGCCAGAGTTTATCCAACATTGGCAATCAATGATAAAGCTCAAATCTATGCTTTCAATAATGGAACTGCTGATGTCAAGATCACAAGTTTGAGTGCGTGGAGCATGAAGAAAGCACAAATAAATTGA 639 0.3881 MALLYRSTDFVNWLQLQHPLHSIQATGMWECPDFFPVFNNSQVNVDYVRHVPKASLSDKQHYYYLIGSYNAAKNLFFPDKGFVLRYDYGKLYASKTFFDYAKRRRILLAWVNESSSRADNINKGLSGIYTDMTTYGTFVDMDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAINDKAQIYAFNNGTADVKITSLSAWSMKKAQIN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01046 212 SUPERFAMILY Concanavalin A-like lectins/glucanases 126 208 IPR013320 -
Pste6g01046 212 SMART glyco_32 1 166 IPR001362 GO:0004553|GO:0005975
Pste6g01046 212 Pfam Glycosyl hydrolases family 32 N-terminal domain 2 129 IPR013148 -
Pste6g01046 212 Gene3D - 37 206 - -
Pste6g01046 212 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 129 - -
Pste6g01046 212 SUPERFAMILY Arabinanase/levansucrase/invertase 2 130 IPR023296 -
Pste6g01046 212 Pfam Glycosyl hydrolases family 32 C terminal 132 205 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01046 Pste-Chr6 4275701 4277949 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01046 131 212 Glycoside Hydrolase AT1G55120 62.195 2.25e-30 115