Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01042 GACTCATCTATTTCATCCCATTTCTACACTTTCTTCACCCAACACAAACACAAACACAAAAAGCTCTCTCCAGACCCAGAATTTCAAACACACTCGCCTCTCGCCGAGCGTGCCCTTCTGACATGATCATCGTTTTCTTCCTCGCAGATTCTTCATAGAGGAATACCGCTGCTCGTCATTGGTTCATTTAAAATTTGGAATGATTTGATGGAATATGATTGGCAGCTTCAACCACACTGATTTAGTTGAGTGCTGTGAAGCTGGAATGGAGAAATTTGATTCTCAAGAATCTGGCCCCGTCTTGAAGAAGTCAAAAACCGAAATTTTGGCTTCTCAAGATGTAGATAATTGTGAAATGGAAGAAAGTGAGGACAGACTTAGTGACATGCCGGATTGTCTTATCCATCATATTTTGTCATTTATGGAAACAAAGGATGCACTTCGAACTTGTGTATTATCAAAAAGGTGGAGATATCTTTGGGCTTCAGTGCCCTGCCTGAACTTCAGTAGCAAATCCTTCACTCGGTTGGTTGATTTCAAGAAGTTTGTGCAGTGGATCCTAAACCACCGTGACTCTTCTCATGTCAAACTTCTTGTTTACTATCGCTTTGGGGTAGATTATGCGACAGATCAAGGTCTATTGAATAAAGTTATTGAGTATGCAGCATCTCATGGGGTTGAAGAAATCAAAATCAATCTCCGGGCAAAAACCTCTGGCAGTCCACCTGTTGAAATTCCTTTGTCTCTATTTACTTGCCAATCTTTGAAAAAGCTTGAGTTGAAAGATTGCCATCCTACAAATGTATCATCCCCTTTAGGTTGCAAATCATTGGACTTGTTGCATCTGGAACAGTTTTCAATGTATCCTGCTGCAGCTGACTTTTCAAATCCATTTGCAAGCTTGGCAGAACTATTTGGTTTTACAACGTTGACTACACTGCATTTAAATAACTTCACCCTGTGTTATACAGGAATTGACTGTTTGGATCCATTTGCTAATTGTGTTCATTTGAAGAATTTGCACTTAAGCGAAATGTCCTTTAAGTCTGATTTGAACCCTAAGGATTTTGTGATATCTGCTCCTAAACTCAGTAACTTGAATCTAATGTGCAACCGCTTTAAATGCAAGATTGTAATTGCTGCGCCACAGGTTTCCAATTTCACTTACCTGTATTCTACACCTTGTGCCTTCTTTGAGTTCCGTCTTCCTTCTTTGGATGGCTTGATCGTTGATATTCATGAACCGCATGATCGATTGGAAAAATGTCGTCGAAGGAAAAGAGAGGAAACTTTACATGGATTGATCAATATGTTACGAGGACATCATAGTGCAGAAGCTGTCAAACTATCCTTCTGTACAGTAGCGGTTACTTGTGGGACTGCAGCCCTGTTAAAGCCAGAACGTTTGTCTTCTAGTAAATTGAAGTCATTGAACTTTGGAGTGGGATCAACATACAAAATCTTCATCAACAACCTTGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGCAGATTTTGAGATTGTGGCTGATATTTTGAGGTGGAGGTTTGATTCATACCGAGGTGGATGAAAGTTAACCCCAATACTTGGATCCTTATGATCTAAACAAGAATTAGTACTTGGTATAGTTTGATTGGGAAAAAAAGGGATATATCATATATGTGGTTGATTTTTGAAAAACAGGCTATAACGAAATAGAAATTCAAATACTTTTTTTTGCAAATTTGTATCTTGACTCTCATTTTATAATCATATTCCCCCTCCCCAAAATGACTGAATACAGACCTTTTTTATTTTAAAATAATTGAAAAGTAG 1824 0.3854 MIGSFNHTDLVECCEAGMEKFDSQESGPVLKKSKTEILASQDVDNCEMEESEDRLSDMPDCLIHHILSFMETKDALRTCVLSKRWRYLWASVPCLNFSSKSFTRLVDFKKFVQWILNHRDSSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKINLRAKTSGSPPVEIPLSLFTCQSLKKLELKDCHPTNVSSPLGCKSLDLLHLEQFSMYPAAADFSNPFASLAELFGFTTLTTLHLNNFTLCYTGIDCLDPFANCVHLKNLHLSEMSFKSDLNPKDFVISAPKLSNLNLMCNRFKCKIVIAAPQVSNFTYLYSTPCAFFEFRLPSLDGLIVDIHEPHDRLEKCRRRKREETLHGLINMLRGHHSAEAVKLSFCTVAVTCGTAALLKPERLSSSKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVADILRWRFDSYRGG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01042 454 Gene3D - 40 95 - -
Pste6g01042 454 Pfam F-box domain 55 92 IPR001810 GO:0005515
Pste6g01042 454 SUPERFAMILY L domain-like 172 324 - -
Pste6g01042 454 CDD F-box_AtFBL13-like 55 90 - -
Pste6g01042 454 PANTHER OS11G0201299 PROTEIN 236 407 - -
Pste6g01042 454 SMART fbox_2 58 98 IPR001810 GO:0005515
Pste6g01042 454 ProSiteProfiles F-box domain profile. 52 105 IPR001810 GO:0005515
Pste6g01042 454 Gene3D Ribonuclease Inhibitor 144 337 IPR032675 -
Pste6g01042 454 SUPERFAMILY F-box domain 51 107 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01042 Pste-Chr6 4238931 4243369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01042 51 216 EF-hand Containing Proteins AT5G41840 31.551 4.15e-12 66.2