Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01033 atggcgttttcatcctccaccaaccactggatccacgacgtcttcttcagcttcagaggagaagacacacgttacggtttcgtggacattctcaatgctgccctaaagagaaagggagtgttgactttcatagatgacaagcttccaaggggacgggagataaagccagaactagtgcgagccataaaagggtctcggatatccattgtggttttctccatcaactatggttcttctagatggtgtcttgatgagcttgttgagatcatggaatgtcgtaaaacctatggccaagaggttttgcccttattttttaatgttgatccgtcgaatgtgcgtcatcaaacgggtgcttttggagagcagtttgaagcacttgaaggcacccccgaaatgttaaggaaatggaagagtgcactcactgaggctgcaaatatttctggttgggatgcaaggaatagaattgaagatgaagtattggaagaagttgctgaggacattatgggaaaactagatggggactcattatctattaccgaatttccggttggattaaaatcccgtgcccgagaaatgattaagttgattcaagatgaatcgagtcagaaaggttgcgttgtagggatatgggggatgaggggattgggtaaaacaactgtggccaaagtcatctacaatgaaattcgtcggagatttatgcatagatgtttcattgataacattagagaagttgatgtaaacaatagcaaagagtgtattgattttcaagaaaaacttctttctggtcttggaatcaatacaagggataagatatatagtgttgctatgggaacatctatgattgagaaaagccttgttggaaaaggggctctcattgtacttgatgatgtgactaattttgaacaattaaaaacactatgtggaaatattggaaagcttctcctggaaagtgtgatcatcatcacgactcataatgagcgcgttcttcgtatccttcaaggtcttaagtatacagtccatatttgtagactaaaggaaatggacaaaaatgagtcccttgaacttttcagttggcatgcttttaggcaagaatgtccaagactagaattgtctaaaaactcaatggatgttgttgcttactgtgggggacttccactagctcttgaagtccttggatcttacttatttgagaagaccaaagaagaatgggaatgtgtgttaaacaaactaaagaaaattcctaatgatcaagtacatgagaaactgaagataagctatgatggttgtgaccttcatcctgtggatggaataacaaccttggtggaaaggtgtctcataaagattggaaagaaaaacaagctcaacatgcatgatttggtacgtgatatgggaagagaaattgttcggcgaagttctaaggatgaacctgagaagcgtaatcgattgtggcttcacaaagaagtagttgatgtcttgtcagatgaaactggaacaaatgcaatcgagggcttgactttaaagttgcaaaagaacagtgtacttcacttcaataccaaaacatttgagaaaatgaagaaattgagacttttgcaacttgattatgtacaacttgatggagattataagtatcttaatagaaacctaagatgggtttgttggcaaggatttcctttaaaacacataccagacaacttgtaccaggaagaagtaatttctattgaattaaagtatagtaatattaggcaagtttggaaggagcaaaagtggttgaagaatctaaagatccttaatcttagccattcaaagaacttgatacgcactcctgatttctcaacactaccaaatctttcaaagctcattctcaaagattgtccaagcttgactgaggtccaccaatccattggagatctgactaatcttctcttgataaatttgatggactgtaccaaccttagcaatcttccaagtacaatctataagtcaaaatctgtgcacactttcatcctatctggttgttcaaagattgataggttggaagaaggtataggggagatggaatcattgactacactgattgcaaaagatgcaggcataaaggaaattcctcgttcaatagtaaggttgaaaagcataggatatatatccttatgtggatatgaaggattagcaaatgacatatttcctgctctcgtattgtcttgggcgtcaccaaaggcaaatctcgaatctagtactcaaccatttaagggcacgaaaagttctataatctccatgaatattcgagataaaaattgccgtgacctgttgccaatgatacatgatcgactttcagaatttcgatgtattttagtgcagtgttactcggagtctcaactaagccttgagttagcaagaattatggatgccttattaagtgatgtaaaatttactgaattggaaaaaacatcatatccatcacaagttttggaaaatgcaatgaaatcttttttgatgattggaaacgaaagctgccaccaagtcatcaatatgctttacaagaccgtctcaaaggaattgggagccaatgattctagtgatgcttcccttcccggtgataaatatccttattggcaagcttatgtaggtcaaggacattcagctcgttttcaatggcctgaggatagtgatttttgcttgaaaggaatggctttgtgtgttgtttatccatcaacctataaaaacaaggaagctgaatgtcttactggtgtcttgattgttaattacacaaagtacaccatccaaatattcaagcaggatgcaataacttctttcaatgatgaagattggcaaggcataatatctaatctaagacctagtgacgatgtgcagatttgtgtagcatttgggcatggattgacagttctgaagacagctatctatctaatatacgatcagccaattgctgcgaaaaaggaggaatcacctaaagtgaacatgctacgatcagaggtatggtga 2997 0.0 MAFSSSTNHWIHDVFFSFRGEDTRYGFVDILNAALKRKGVLTFIDDKLPRGREIKPELVRAIKGSRISIVVFSINYGSSRWCLDELVEIMECRKTYGQEVLPLFFNVDPSNVRHQTGAFGEQFEALEGTPEMLRKWKSALTEAANISGWDARNRIEDEVLEEVAEDIMGKLDGDSLSITEFPVGLKSRAREMIKLIQDESSQKGCVVGIWGMRGLGKTTVAKVIYNEIRRRFMHRCFIDNIREVDVNNSKECIDFQEKLLSGLGINTRDKIYSVAMGTSMIEKSLVGKGALIVLDDVTNFEQLKTLCGNIGKLLLESVIIITTHNERVLRILQGLKYTVHICRLKEMDKNESLELFSWHAFRQECPRLELSKNSMDVVAYCGGLPLALEVLGSYLFEKTKEEWECVLNKLKKIPNDQVHEKLKISYDGCDLHPVDGITTLVERCLIKIGKKNKLNMHDLVRDMGREIVRRSSKDEPEKRNRLWLHKEVVDVLSDETGTNAIEGLTLKLQKNSVLHFNTKTFEKMKKLRLLQLDYVQLDGDYKYLNRNLRWVCWQGFPLKHIPDNLYQEEVISIELKYSNIRQVWKEQKWLKNLKILNLSHSKNLIRTPDFSTLPNLSKLILKDCPSLTEVHQSIGDLTNLLLINLMDCTNLSNLPSTIYKSKSVHTFILSGCSKIDRLEEGIGEMESLTTLIAKDAGIKEIPRSIVRLKSIGYISLCGYEGLANDIFPALVLSWASPKANLESSTQPFKGTKSSIISMNIRDKNCRDLLPMIHDRLSEFRCILVQCYSESQLSLELARIMDALLSDVKFTELEKTSYPSQVLENAMKSFLMIGNESCHQVINMLYKTVSKELGANDSSDASLPGDKYPYWQAYVGQGHSARFQWPEDSDFCLKGMALCVVYPSTYKNKEAECLTGVLIVNYTKYTIQIFKQDAITSFNDEDWQGIISNLRPSDDVQICVAFGHGLTVLKTAIYLIYDQPIAAKKEESPKVNMLRSEVW 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01033 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 723 IPR044974 GO:0006952
Pste6g01033 998 Pfam TIR domain 12 172 IPR000157 GO:0007165
Pste6g01033 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 431 IPR027417 -
Pste6g01033 998 Pfam NB-ARC domain 194 416 IPR002182 GO:0043531
Pste6g01033 998 Gene3D Ribonuclease Inhibitor 495 772 IPR032675 -
Pste6g01033 998 SUPERFAMILY L domain-like 504 729 - -
Pste6g01033 998 ProSiteProfiles TIR domain profile. 10 171 IPR000157 GO:0007165
Pste6g01033 998 PRINTS Disease resistance protein signature 588 604 - -
Pste6g01033 998 PRINTS Disease resistance protein signature 381 395 - -
Pste6g01033 998 PRINTS Disease resistance protein signature 284 298 - -
Pste6g01033 998 PRINTS Disease resistance protein signature 206 221 - -
Pste6g01033 998 Gene3D - 346 430 IPR042197 -
Pste6g01033 998 Gene3D - 9 175 IPR035897 -
Pste6g01033 998 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 173 - -
Pste6g01033 998 Gene3D - 176 336 IPR027417 -
Pste6g01033 998 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 149 IPR035897 -
Pste6g01033 998 SMART till_3 11 146 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01033 Pste-Chr6 4202569 4210518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01033 3 708 WRKY Transcription Factor Family AT4G12020 27.880 1.54e-56 212