Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01030 ATCTCAACAACAAGAAATGGCAACACCACAACCCAGGCCTGTGCTGCATGCAAGTACCAACGTAGGAAATGTGCCCCTGATTGCATTCTGGCCCCTTATTTCCCTCACGATCGCCAAAGACAATTCCTCAACGCACATAAGCTCTTCGGTGTAAGCAACATCACCAAAATCATCAAGTTTCTCACCCCTCACGACAAGGACCAAGCCATGCGCACCATCATTTATCAATCTGACATGCGTGCCTCTGACCCTGTTGGCGGTTGCTATAGATACATTTTGGATCTCCAGGCCCAGATCGATTTCTACCGAGCCGAACTCGAACTCGTCCTTCAACAACTCGCCATTTTCAGAGCCCAGCAGGCTCACCATGCCCTCTATGCTCCCCCACCTAACAATCTTAACGTCCCTCTCAATGCTGATGGTGAGGTTTTGAATGCTGATCCCTTGGGATTCTACACCCATCACCAACATTATCACCCTCAACAGGACCACTTTCTTATCATGCACCAAAATGCTCACCCCAACCCTTTGCACTTCCACCACGAACAAATCAACTCCTGGCCTCTCCACAACTCCACTGTCTCCCTTTGCAGTAATCTCACCGATGACTACGATCACAAGCCTGTCATTGACATTGACTCTGATGAGAGAAGTGAGTTAGGCTTTGAGTCTGACGACTTAGTCCATCGCAGTGATGAAGCAGTTTTGTTTAAGATAGACGATGCAGTAATAAAAGCCGAGGCTGACTGCATGCAACAAGCTCAGGACCACGACCTCAAAGGGGCTGCAACTTCGTTTACTCTCACAAATTGTACTTGC 819 0.4835 ISTTRNGNTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKFLTPHDKDQAMRTIIYQSDMRASDPVGGCYRYILDLQAQIDFYRAELELVLQQLAIFRAQQAHHALYAPPPNNLNVPLNADGEVLNADPLGFYTHHQHYHPQQDHFLIMHQNAHPNPLHFHHEQINSWPLHNSTVSLCSNLTDDYDHKPVIDIDSDERSELGFESDDLVHRSDEAVLFKIDDAVIKAEADCMQQAQDHDLKGAATSFTLTNCTC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01030 273 Coils Coil 92 112 - -
Pste6g01030 273 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Pste6g01030 273 Pfam Lateral organ boundaries (LOB) domain 13 108 IPR004883 -
Pste6g01030 273 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01030 Pste-Chr6 4184510 4185432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01030 12 123 AS2 family AT3G13850 76.316 8.04e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste6g01030 LOB 6.7e-36 No_clan