Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01025 ATGTATCGGTTAGCTCGTAGAGTAGCTTCCTCCATTGATTCTCCTTCTGCTAAGAACCTCGTATATGGTGGTGGTGGGCTGTTCTCGAGCAGAAATTATGTGAGCAAAGATATCAACTTTGGGGTTGGGGCTCGTGCCGCAATCCTCCAGGGGGTAACTGAGGTTGCCGAAGCTGTCAAAGTTACCATGGGACCCAAGGGTCGCAATGTTATAATTGAGAGAAGTCGTGGGAATCCTAGGATCACCAAGGACGGTGTGACTGTGGCCAAAAGTATCAAATTTAAAGACAAAGCTAAAAATGTTGGCGCGGATCTTGTCAAGCAGGTGGCCAAGACAACCAACACCTCTGCTGGCGATGGCACAACTTGTGCAACTGTTTTGACTCAGGCAATACTCACAGAAGGATGCAAATCAATTGCTGCTGGCGTAAATGTTATGGATTTACGAAATGGAATAAATAAGGCAGTTGATGCTGTAATTACTGACTTGAAAACCAGAGCATTGATGATAAGTACACCAGAAGAGATAACCCAGGTTGGAACTATATCTGCAAATGGGGACCGTGATATTGGAGAATTGATAGCAAGGGCAATGGAGAAAGTTGGGAAGGAGGGAGTCATTACTGTTGCAGATGGGAATACTTTGGATAATGAGTTGGAAGTGGTAGAAGGAATGAAGTTAACCAGAGGCTACATATCTCCTTATTTTATTACTGATCAGAAGACCCGGAAATGTGAATTGGAGAACCCCTTTATTCTCATCCATGACAAGAAAATTTCAGACATGAATTCGCTGCTGAAAATACTGGAACTGGCAGTAACGAATAAAAGACCACTCCTAGTTGTTGCTGAAGATGTTGAGAGTGATGCATTGGCTATGCTCATACTCAACAAGCATCATGCTGGACTTAAGGTTTGTGCTGTAAAAGCTCCTGGTTTTGGGGATAGTAAAAGAGCAAATCTAGATGATCTTGCAATTCTTACTGGAGGAGAGGTCATAACAGAGGAGCGCGGTTTGTCTCTTGATAAAATCCAACCAGAAATGCTTGGCACTGCTAAAAAGGTTACAGTCACCATTGATGATGCTATTATTCTCCATGGTGGTGGGGATAAGACGGTCATTGAAGAAAGATGTGAACAGCTGAGGACAGCTATAGAAAAGAGTTCTGCCATGTTTGATAAAGAAAAGGCACAGGAACGGCTGTCAAAACTATCTGTTGGAGAAAGGAAAGATAGAGTAACAGATGCTTTAAATGCCACTAGAGCAGCTGTGGAAGAGGGGATTGTTCCAGGTGGTGGAGTTGCTCTCTTATATGCTACCAAAATCTTGGATAACCTTCTAACTCAAAATGAAGATGAGAAAAGAGGAGTAGAGATTATTCAAAATGCTCTCAAGGTGGCGCCAACATTTACAATAGCTTCAAATGCTGGTTTTGATGGTGCTTTGGTCCACAGCAAATTGTTGGAGCAAGATGATCATAGTTTAGGTTTTGATGCCGCTAAAGGTGTCTATGTTGATATGGTAAAGGCTGGAATAATAGATCCTCTTAAGGTTGTCAGAACAGCTTTGGTAGATGCTGCCAGTGTGTCATTGCTACTGACGACAACTGAGGCAACTGTGGTGGATAATCCACATGACAAAAATAAACCTCCAAGTCGGGTGCCAGATATGGATGATTTGGACCTCTAACATGCTTTACCAAATGATGAAACATTTTTTTGTACCAATATCAGATTTTGTTCTTCCTTCTAAGATGTAGCCGAGGCCGAGGTATAAACTTGTGGCAAAACCGTTGTATTTTACAAAGTGAGGTTAAAATTATGCAACCTTCTACTTACAATGTTTTAGGAAAATTCAAGTCTCACGTAGTGCAAAAGGCGAGTTTCTGCTCCATTTCCTTGCTCCCCCGATTGTAATGCAATATGCTTTAGTCACTAAATTTCATTGAGTTCTGTTATTGTTTAACCTGTTAGCTATTTTTTTACTTATTCTACTTGTAATTTTAATGATACTATTGTTACACCATTATTTTATAGCATGTTTGGATTATTGTTAGCAATTGGGCACAATAGCGTGGTAGCAGAGAACCGCACCGCCC 2098 0.4137 MYRLARRVASSIDSPSAKNLVYGGGGLFSSRNYVSKDINFGVGARAAILQGVTEVAEAVKVTMGPKGRNVIIERSRGNPRITKDGVTVAKSIKFKDKAKNVGADLVKQVAKTTNTSAGDGTTCATVLTQAILTEGCKSIAAGVNVMDLRNGINKAVDAVITDLKTRALMISTPEEITQVGTISANGDRDIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLTRGYISPYFITDQKTRKCELENPFILIHDKKISDMNSLLKILELAVTNKRPLLVVAEDVESDALAMLILNKHHAGLKVCAVKAPGFGDSKRANLDDLAILTGGEVITEERGLSLDKIQPEMLGTAKKVTVTIDDAIILHGGGDKTVIEERCEQLRTAIEKSSAMFDKEKAQERLSKLSVGERKDRVTDALNATRAAVEEGIVPGGGVALLYATKILDNLLTQNEDEKRGVEIIQNALKVAPTFTIASNAGFDGALVHSKLLEQDDHSLGFDAAKGVYVDMVKAGIIDPLKVVRTALVDAASVSLLLTTTEATVVDNPHDKNKPPSRVPDMDDLDL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01025 562 MobiDBLite consensus disorder prediction 542 562 - -
Pste6g01025 562 SUPERFAMILY GroEL equatorial domain-like 39 540 IPR027413 -
Pste6g01025 562 ProSitePatterns Chaperonins cpn60 signature. 422 433 IPR018370 GO:0005524|GO:0006457
Pste6g01025 562 Gene3D GroEL 224 405 IPR027409 -
Pste6g01025 562 SUPERFAMILY GroEL apical domain-like 216 405 IPR027409 -
Pste6g01025 562 Pfam TCP-1/cpn60 chaperonin family 55 543 IPR002423 GO:0005524
Pste6g01025 562 NCBIfam chaperonin GroEL 35 545 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 Gene3D - 169 427 IPR027410 -
Pste6g01025 562 PRINTS 60kDa chaperonin signature 300 323 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 PRINTS 60kDa chaperonin signature 59 85 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 PRINTS 60kDa chaperonin signature 115 142 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 PRINTS 60kDa chaperonin signature 382 407 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 FunFam 60 kDa chaperonin 224 405 - -
Pste6g01025 562 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 35 551 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 Gene3D - 38 541 IPR027413 -
Pste6g01025 562 SUPERFAMILY GroEL-intermediate domain like 170 236 IPR027410 -
Pste6g01025 562 CDD GroEL 36 542 IPR001844 GO:0042026|GO:0140662
Pste6g01025 562 MobiDBLite consensus disorder prediction 541 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01025 Pste-Chr6 4166155 4173887 Dispersed