Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01023 atggaattctcgtgttcttcatcatcctttccacgcccaaatccctattcctcttcaaaccctaaaccccaacgcgactacgatgtgttcatcaatttcaggggagaagacacgcgtaagaagtttgtctgtcatctctatcgtgcgctctcgaatgctggaatcaacgctttcttcgatgaggagactctgtccaagggagatcgtctggaagagctacttcgagcaatagaacggtctcagatagcgatagttgttttctccgaaaactacgctgattctggttggtgtcttgatgagcttcaaaaaatcatggaatgccacgaaagtcatggcctgtgcgttgtgcctgtgttttactatgttgaaccgtcccatgtacgtaatcagaagggtgattttggaaaggcgtttacagcatctgtagttaaaggaatttcaagagaagaatttaaagctatgaagaagtggaagctcgcactcatcaaagctgcaaaattgagtggctggaatgccatgaattacagcaacgaagctgaactagtggaggaaattgttaacgacgttcataataaactggaatatgatgtcttgtctagtattgaatttcctgttggattagaatatcgtgtagaaaaagttattcgattaactgaaaatcaatccaccaaagtctgttgcattgggatatggggaattggaggatcgggtaaaactacaattgccaaagccatctacgatcgaattcgtcgtaggttcaagaataaaagtttcattgaggatattagagaaacttgtcaaacagaaaggagagggcttgtttatttacaagaaacccttctttttgaggtcctaaaactaaagttggagatatctagcattgggaagggagcaaatatgattaagaacagacttgctgagaaaaaggcactcattgtacttgatgacgtgaatgagtctgagcagttaaatgccctgtgcggaaattgtaaatggtttggtcaaggaagtgtaataatcattacaactagaaatctacgcctgcttcaccaatttaaagtaacaaataaggttttcagttttgtttatgagatggagggaatgaatgaaaatgagtcccttgagcttttcagttggcatgcttttggacaaacagaaccagtagaagactttagtgcacttgcaagagatgcagtcgcttgctgtggtggattaccactagctcttgaagtccttggttcttatttatgcatgaggaacaagaaagagtgggtaaatagaggctatgccacggaaatactaaatggttgtgaactacctgctgatattggaataacaattctcatagaatgtagtctcataaaagttgataagaacaataaacttggaatgcatcgtttgctaagagtcatgggaagagaaataattagtgaaagctcaaaaaacgaacttgggaagtgcagtcgattgtggtttcaaaaggatgcattggatgtattaacaaagaatactgggacgggagatattgtgggattgtctttgaaactgcatttaaccgacggagcttgcatcagtgctgatgcttttgagcaaatgaagaatttgagactgttgcgacttaatcatgtagaactcacgggagattatgggtatctttctgagcaactaagatggctctattggcaagggtttcctttagaatacattcctaacaacttgtatttggaacgtgtaattgcgattgatttcaaacacagtaatcttagagtagtttgggaagaacccaaggttttgcggtgtctaaaaatcctcaatcttagtcattccaagcacttgatagaaacccctgacttttcaaaactaccaaatcttgaaaagctcattcttaaacattgtccaagtttataccagatcgacaaattggatgaagatattggacaaatgaaatccttgacaactctaattactgaaaatattgttgtcaaacaagttccattttctatagtgagctcaaaaaatattggttaccaagaagtcttcgatactctcagcaagcgcatctccgagggactggcaaccaataagtcttttgatgtgtgtttcccaggagaccactatccttattggtttgcccatacaggtgatgagagacattcagtgtatttcactgttcctatggattgttgtctgaagggaatgactttgtgttttgtttatcaatcaatgcctgaaaccacggcaattgactatcttatcagtgtcttcattgttaattacacaaagtgcaccatccagatatacaagcaagacacagtaatttcctttaataatttagattggcaggaaataatttcacatatggagcctggagataaggtggagatttttgtgagttttaggcgtggattgttggtcaagaagacagctgtctatctcatgtatgacaagtctattgacatggaaatcgagcctattaaaccattaagaaagtttatagttggaagagaaaaagcgacagaatatccaagtcttggattcatcaatagcagtagctgtttactagacaaataa 2571 0.0 MEFSCSSSSFPRPNPYSSSNPKPQRDYDVFINFRGEDTRKKFVCHLYRALSNAGINAFFDEETLSKGDRLEELLRAIERSQIAIVVFSENYADSGWCLDELQKIMECHESHGLCVVPVFYYVEPSHVRNQKGDFGKAFTASVVKGISREEFKAMKKWKLALIKAAKLSGWNAMNYSNEAELVEEIVNDVHNKLEYDVLSSIEFPVGLEYRVEKVIRLTENQSTKVCCIGIWGIGGSGKTTIAKAIYDRIRRRFKNKSFIEDIRETCQTERRGLVYLQETLLFEVLKLKLEISSIGKGANMIKNRLAEKKALIVLDDVNESEQLNALCGNCKWFGQGSVIIITTRNLRLLHQFKVTNKVFSFVYEMEGMNENESLELFSWHAFGQTEPVEDFSALARDAVACCGGLPLALEVLGSYLCMRNKKEWVNRGYATEILNGCELPADIGITILIECSLIKVDKNNKLGMHRLLRVMGREIISESSKNELGKCSRLWFQKDALDVLTKNTGTGDIVGLSLKLHLTDGACISADAFEQMKNLRLLRLNHVELTGDYGYLSEQLRWLYWQGFPLEYIPNNLYLERVIAIDFKHSNLRVVWEEPKVLRCLKILNLSHSKHLIETPDFSKLPNLEKLILKHCPSLYQIDKLDEDIGQMKSLTTLITENIVVKQVPFSIVSSKNIGYQEVFDTLSKRISEGLATNKSFDVCFPGDHYPYWFAHTGDERHSVYFTVPMDCCLKGMTLCFVYQSMPETTAIDYLISVFIVNYTKCTIQIYKQDTVISFNNLDWQEIISHMEPGDKVEIFVSFRRGLLVKKTAVYLMYDKSIDMEIEPIKPLRKFIVGREKATEYPSLGFINSSSCLLDK 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01023 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 668 IPR044974 GO:0006952
Pste6g01023 856 Pfam NB-ARC domain 208 420 IPR002182 GO:0043531
Pste6g01023 856 SMART till_3 26 167 IPR000157 GO:0007165
Pste6g01023 856 Gene3D - 367 433 IPR042197 -
Pste6g01023 856 Gene3D - 20 191 IPR035897 -
Pste6g01023 856 SUPERFAMILY L domain-like 514 669 - -
Pste6g01023 856 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 195 - -
Pste6g01023 856 ProSiteProfiles TIR domain profile. 25 193 IPR000157 GO:0007165
Pste6g01023 856 PRINTS Disease resistance protein signature 596 612 - -
Pste6g01023 856 PRINTS Disease resistance protein signature 304 318 - -
Pste6g01023 856 PRINTS Disease resistance protein signature 227 242 - -
Pste6g01023 856 PRINTS Disease resistance protein signature 402 416 - -
Pste6g01023 856 Pfam TIR domain 27 194 IPR000157 GO:0007165
Pste6g01023 856 Gene3D - 192 359 IPR027417 -
Pste6g01023 856 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 170 IPR035897 -
Pste6g01023 856 Gene3D Ribonuclease Inhibitor 492 684 IPR032675 -
Pste6g01023 856 MobiDBLite consensus disorder prediction 1 23 - -
Pste6g01023 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01023 Pste-Chr6 4144316 4149048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01023 20 632 WRKY Transcription Factor Family AT4G12020 26.968 5.13e-56 208