Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01019 atggattcttgcaacagtggtgatcaagattccatccttggcgctgacactaaaagacctgatacaactatgttggagcccggtaggaccagtaacgttgaacacaaccccaagaagcgatcctgggtttcgaggagagcatcagccacgttgctcactagcgacgcttcttccaatttcaaagccatggttcaacagttcactggaatgcctacacaggcgttttctttacccaaaatatccaaacccaaacctaattccaaaggcacagtccaatctctgaaagggtttcgatctgcttctttaccggagccgaaacccaatctggaaggtcaatcgaagaaaaaggttgatacttttctgtccacatccacatccagttccagttccttttctaatctgaaatacgatgtgttcatcaatttcagtggaaattatttgcgaaagaacttcgtttctcatctctctaatgccctttccaaaactgctgcagtcaagacttcctttgacgggaagaatccatccaagctagaacagcgaaatctaatgcaagcaatacaaatgtctcagatagctatagttgttttctccaaaagctataccggatctggttggtgtcttcatgagcttcaaaaaatcattgaatgccacgaaacttctggccagggtgttctggttgtattttacgatgttgaccaatccgatgttctttatcggaagggtgatttcggaaaagcgttgatagcagctgcagaaagaagattttcaggagaacattttgcatctgggttatcgagttggaagctctcactcacgcaagctgcaaatttctcctgctgggatgccacgaaatacagcaacgaagctgaactagtggaggaaattgttaacggtgttctaagtaaactggaactgcagcccaaagtcttgcctattattaaatttcctgttggattggaaacccatttggaaaaagttattggatttattgcaaatcaatcaacaaaagtttgtatgatagggatatggggaatgggaggatcaggtaaaactaccacagccaaagccatctacaataaaatctatggtagtttcatggatagaagtttcattacagacattagacaaatttatcaagaaggtagaaaagggcacgttcgtttacaagaacaacttcttttagatgttttgaaaacaaaggtccagatacaaagcgttgggaagggaacagctgtgatcaagagcagactttgtgggaaaaagttgctcattgtactggatgatgtgaatgagtttgaccaattaaaacacatatgtggaaaccgtgattggtttggtcaaggaactgttataatcattacaactagatatctacagctactgaaccaacttaaagttgattatgtttataaaatagaggaaatgaatgaaaatgagtcctttgagctttttagtttgcatgcttttagagaagcaaaaccaagagaagactttgatcaaattgcaagaaatatagttgcttattgtggaggactaccactagctcttcaagccgttggttcttatctatttgggaagacaaaggaagtatgggaaagtgtattgtcaaaactagacataactcccgttaatcaagttaaaagcagattaaaagtaagctttgatgatttacatgatcagatggaaaaggatatatttcttgacatatgttgtttctttattggtgaaaacagagcctacgttacagagatactaaatggttgtggattacatgctgatattggaataacagttctcatagagtgtagcctcctaaaagttgaaaagaacaacaaacttgtaatgcatcctttggtacgagacatgggaagagagataattcttgaaaaatcaagaaacgaacttgggaagtgcagtcgattgtggtttcaaaaggatgtagttgaagtattgacaaataatagtgggacaaaagcaattgaaggattggctttgaaattgaatttaaacaacaaatgttgcttcaaagtcgactcttttaaggaaatgacaagtttgagactgttgcaacttgattatgtagatcttactggagattatgggtatctttctaagcaattgagatggatctcttggaaaggatttcctctaaaatacatacctaacaacttccatttggaaggtgatttgaagtggctaaaaatcctcaatcttagtcattccaagtacttgacacaaacccctgacttttcaaaattaccaaatcttgaaaagctcattctcaaagattgccctcgtttgtgtaaggtacacgagtccattggagatctcaacaatcttgttatgttagatttgaagaactgtacaagtcttgcctctctgccaaggagagcttataagttgaaatctgtgagatttctcaatctttcgggttcttctaagattgacaaattggaagaagatatagtacaaatggaatcgttgacaatgttaatagccaaaaatactgctgtgaaacaaattcccttcgcaataggattgccaaccagtgaggcttattatgtttttctccccggtgacaattatccttattggttagctcatacgagtgaggggaattcagtgtgttttactatgcctgatgatcgttgcataaagggaatgactttgtgtgttgtgtattcgtcaaccactgaaaatacaacaactgaaaatcttaatagtgtgttgatggttaattacacaaagtgtgccattcaggtacacaagcgagacacaataatgtcctttaatgatgcagattggcagggcataatatcacattttgcacctggagacaaagtggagatttttgtaatttttgggaacgaattggctatcaagaagacagctgtgtatttaatgtatgatgaattaattgacatgcaaatggagccatctttcgagtga 2949 0.0 MDSCNSGDQDSILGADTKRPDTTMLEPGRTSNVEHNPKKRSWVSRRASATLLTSDASSNFKAMVQQFTGMPTQAFSLPKISKPKPNSKGTVQSLKGFRSASLPEPKPNLEGQSKKKVDTFLSTSTSSSSSFSNLKYDVFINFSGNYLRKNFVSHLSNALSKTAAVKTSFDGKNPSKLEQRNLMQAIQMSQIAIVVFSKSYTGSGWCLHELQKIIECHETSGQGVLVVFYDVDQSDVLYRKGDFGKALIAAAERRFSGEHFASGLSSWKLSLTQAANFSCWDATKYSNEAELVEEIVNGVLSKLELQPKVLPIIKFPVGLETHLEKVIGFIANQSTKVCMIGIWGMGGSGKTTTAKAIYNKIYGSFMDRSFITDIRQIYQEGRKGHVRLQEQLLLDVLKTKVQIQSVGKGTAVIKSRLCGKKLLIVLDDVNEFDQLKHICGNRDWFGQGTVIIITTRYLQLLNQLKVDYVYKIEEMNENESFELFSLHAFREAKPREDFDQIARNIVAYCGGLPLALQAVGSYLFGKTKEVWESVLSKLDITPVNQVKSRLKVSFDDLHDQMEKDIFLDICCFFIGENRAYVTEILNGCGLHADIGITVLIECSLLKVEKNNKLVMHPLVRDMGREIILEKSRNELGKCSRLWFQKDVVEVLTNNSGTKAIEGLALKLNLNNKCCFKVDSFKEMTSLRLLQLDYVDLTGDYGYLSKQLRWISWKGFPLKYIPNNFHLEGDLKWLKILNLSHSKYLTQTPDFSKLPNLEKLILKDCPRLCKVHESIGDLNNLVMLDLKNCTSLASLPRRAYKLKSVRFLNLSGSSKIDKLEEDIVQMESLTMLIAKNTAVKQIPFAIGLPTSEAYYVFLPGDNYPYWLAHTSEGNSVCFTMPDDRCIKGMTLCVVYSSTTENTTTENLNSVLMVNYTKCAIQVHKRDTIMSFNDADWQGIISHFAPGDKVEIFVIFGNELAIKKTAVYLMYDELIDMQMEPSFE 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01019 982 SUPERFAMILY "Winged helix" DNA-binding domain 546 651 IPR036390 -
Pste6g01019 982 SUPERFAMILY L domain-like 635 847 - -
Pste6g01019 982 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 831 IPR044974 GO:0006952
Pste6g01019 982 Gene3D - 130 303 IPR035897 -
Pste6g01019 982 MobiDBLite consensus disorder prediction 75 97 - -
Pste6g01019 982 Pfam TIR domain 135 304 IPR000157 GO:0007165
Pste6g01019 982 Pfam VQ motif 58 73 IPR008889 -
Pste6g01019 982 Gene3D Ribonuclease Inhibitor 651 846 IPR032675 -
Pste6g01019 982 Gene3D - 304 469 IPR027417 -
Pste6g01019 982 SMART till_3 135 277 IPR000157 GO:0007165
Pste6g01019 982 Gene3D - 474 558 IPR042197 -
Pste6g01019 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 569 IPR027417 -
Pste6g01019 982 ProSiteProfiles TIR domain profile. 134 303 IPR000157 GO:0007165
Pste6g01019 982 PRINTS Disease resistance protein signature 509 523 - -
Pste6g01019 982 PRINTS Disease resistance protein signature 339 354 - -
Pste6g01019 982 PRINTS Disease resistance protein signature 416 430 - -
Pste6g01019 982 PRINTS Disease resistance protein signature 775 791 - -
Pste6g01019 982 MobiDBLite consensus disorder prediction 1 45 - -
Pste6g01019 982 SUPERFAMILY Toll/Interleukin receptor TIR domain 125 251 IPR035897 -
Pste6g01019 982 MobiDBLite consensus disorder prediction 75 115 - -
Pste6g01019 982 Pfam NB-ARC domain 320 557 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01019 Pste-Chr6 4116243 4122270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01019 705 857 WRKY Transcription Factor Family AT4G12020 31.818 2.33e-09 59.7