Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00995 AGGTGACTTGCTGGATGGTCACAGGGGAAAGACAGGCTGCAAGAATAAGGGGTTTATATTTGAAAACTATGCTGAGACAAGAAGTTGCTTTCTTTGATAAGGAGACAAATACTGGAGAGGTTATAGGGAGAATATCAGGTGACACAGTTCTCATTCAAGATGCTATGGGAGAGAAGGTATCATTATCTCTGTTTCCTCTGTTTTCTTTTTTACTAGAGTATTTGAGGGCCTTTGCAATAGCATTTGCTAAAGGGTGGCTTCTTACCCTTGTCATGTTGTGCATTCTTCCACTCCTTGTGTTGTCTGGGGCTGCTATGGCCATCATCCAAGGAAATGTTGCATCCTTTACAGGGGAAAATCAAGCAGTGTCTAATTACAACAAATTTCTTGTAGAAGCTTACCAAACAGGCGTTCATGAAGGTTCGCTTGCTGGTGTTGCCCTTGGCACAGTTATGCTTCTTGTTTTTTGTGGTTATGCTTTGGCTGTGTGGTTTGGTGCAAAGATGATACTGGAAAAAGCGTATAATGGTGGCTCAGTGCTTAATGTGATTGCTTCTTTGTTAACTGCTTCAATATTGAGAGATGTTTGTTTCTGTTATCCAACGAGACCTGAGGAGTTGATATTCAATGGTTTCTCCTTTGAGATACCTAGTGGTACAAGTGCTGCATTAGTGGGACAAAGTGGTAGTGGAAAATCGACAGTTATCAGTTTGGTAGAGAGATTCTATGATCCACAAGCTGGTGAAGTTCATATTGATGGCATTAACCTAAAAGAGTTTCAAATTAGGTGGATCAGGGGGAAAATTGGCCTTGTCAACCAGGAGCCAGTGTTGTTTGCATCAAGCATTAAGGATAACATTGCATATGGAAAGGAGGGAGTTACAATTGAAGAGATAAGATCAGCATGTGAACTTGCTAATGCTACTAAATTCATTGATAAGTTGCCGCAGAAGCAGCGCATTGCCATAGCAAGAGCAATCCTAAAAGATCCAAGAATTCTACTTCTAGACGAAGCTACAAGTTCCCTTGATGCAGAGTCAGAAAGGATAGTGCAAGAGGCTCTAGACAGAGTCATGGTTAATAGAACTACTGTTGTTGTTGCACATCGCTTGAGCACAGTGAGGAATGCTGATATGATTGCTGTAATTCATAAGGGGAAGGTGGTTGAAAAAGGAACACTCTCAGAATTACTCAAGGATCCTGAAGGAGCTTACTCTCAATTGATACGTTTACAAGAGGTAAACAAGGAATCAGAAGAAATTACAAGTCATCACAGCAAACCTGAACTTTCTGCAGAATCCTCTAAACAATTAACTAAAATGAAGTCACATAGGAGATCTAGTAGTAGTGAAGCATCTAAAGGGAGTAGTGGCCACAACTCATTTTCATTTTCCCAAGGTTTACTCACAAGAGTTGATGTCCCTCAACCTGAAGAAGAAGATACATTACCCCAAGAGGTTCCACTTCACCGCCTTGCTTCCCTCAACAAACCAGAGATTCTAGTTCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTGTTATACTTCCCATATTTGGGGTGTTGATTTCTTGTGCTGTCAAAACATTTTATGAACCGTTTGATGAGATGAAAAAGGACTCAAAGTTTTGGGCACTAATGTTTGTGGTCCTTGGTCTTGCATCATTGTTGGTAATTCCAGCTCGAGCATACTTTTTTTCTGTGGCTGGATGCAAGTTGATCCAACGTATCAGAATGATTTGTTTTGAGAAAGTGGTGAACATGGAGGTTGGTTGGTTTGATGAGGCTGACAACTCAAGTGGTGCCATTAGTGCAAGACTTTCAGCAATTGCTGCTTCTGTACGTGCCCTTGTTGGTGATGCATTGGGACTATTGGTCCAAAATTTAGCATGTTCCTTGGCTGGTTTGATTATAGCTTTCATTGCATGCTGGCAGCTAGCATTGGTTATTCTTGTTTTGATTCCCCTTATTGGAGCAAATGGCTATGTTCAAACGAAGTTCATGAAGGGATTCAGCAAAGATGCAAAGGAGCCAGACTTGTGGAAGCTGGAAAAGCATCATTCTCAGATGTTTTTCGGTTGTCTTTTTCATGCACTAAATGGAAAAACTGTTTTGCTGGTTTTCTTTGCTCTAACTATGGCAGCTATTGGAGTTTCCCAATTTAGCACACTTTCTCATGATTCTAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTAGAATTATTGATAAGAAATCAAAGATAGATCCAAATGATGAATCTGGTACAAAACTGGATAAGGTTAAGGGGGATATTGAGCTTCATCATGTGTGCTTCAATTACCCGTCAAGACCAAAGATACAAATTTTCCGGGACCTTAGCTTAACTATTCCTACTGGCAAGACAGTGGCTCTTGTTGGTGAAAGTGGAAGTGGCAAATCCACGGTTATTGCATTGTTGCAGAGGTTTTATGATCCTGATTCAGGTGAAATCACACTTGATGGAAAACCAATTCGGGAGTTAAAGCTCAAGTGGTTTAGGCTGCAAATGGGTCTTGTGAGCCAAGAGCCAGTGTTGTTCAATGACACTATTCGTGACAACATTGCTTATGGAAAGAGAGGTGATGCAACTGAAGCAGAAATCCTAGCTGCTGCAAAACTAGCTAATGCC 2651 0.41 MVTGERQAARIRGLYLKTMLRQEVAFFDKETNTGEVIGRISGDTVLIQDAMGEKVSLSLFPLFSFLLEYLRAFAIAFAKGWLLTLVMLCILPLLVLSGAAMAIIQGNVASFTGENQAVSNYNKFLVEAYQTGVHEGSLAGVALGTVMLLVFCGYALAVWFGAKMILEKAYNGGSVLNVIASLLTASILRDVCFCYPTRPEELIFNGFSFEIPSGTSAALVGQSGSGKSTVISLVERFYDPQAGEVHIDGINLKEFQIRWIRGKIGLVNQEPVLFASSIKDNIAYGKEGVTIEEIRSACELANATKFIDKLPQKQRIAIARAILKDPRILLLDEATSSLDAESERIVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHKGKVVEKGTLSELLKDPEGAYSQLIRLQEVNKESEEITSHHSKPELSAESSKQLTKMKSHRRSSSSEASKGSSGHNSFSFSQGLLTRVDVPQPEEEDTLPQEVPLHRLASLNKPEILVLLIGCVAAIANGVILPIFGVLISCAVKTFYEPFDEMKKDSKFWALMFVVLGLASLLVIPARAYFFSVAGCKLIQRIRMICFEKVVNMEVGWFDEADNSSGAISARLSAIAASVRALVGDALGLLVQNLACSLAGLIIAFIACWQLALVILVLIPLIGANGYVQTKFMKGFSKDAKEPDLWKLEKHHSQMFFGCLFHALNGKTVLLVFFALTMAAIGVSQFSTLSHDSSKAKSATASIFRIIDKKSKIDPNDESGTKLDKVKGDIELHHVCFNYPSRPKIQIFRDLSLTIPTGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGKPIRELKLKWFRLQMGLVSQEPVLFNDTIRDNIAYGKRGDATEAEILAAAKLANA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00995 879 Pfam ABC transporter 780 865 IPR003439 GO:0005524
Pste6g00995 879 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 186 - -
Pste6g00995 879 MobiDBLite consensus disorder prediction 411 457 - -
Pste6g00995 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 751 879 IPR027417 -
Pste6g00995 879 PANTHER ABC TRANSPORTER B FAMILY 108 185 IPR039421 -
Pste6g00995 879 SMART AAA_5 788 877 IPR003593 GO:0016887
Pste6g00995 879 SMART AAA_5 213 382 IPR003593 GO:0016887
Pste6g00995 879 Pfam ABC transporter 205 336 IPR003439 GO:0005524
Pste6g00995 879 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 499 673 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g00995 879 FunFam ABC transporter B family member 20 179 408 - -
Pste6g00995 879 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 182 405 IPR003439 GO:0005524
Pste6g00995 879 CDD ABC_MTABC3_MDL1_MDL2 188 407 - -
Pste6g00995 879 Gene3D ABC transporter type 1, transmembrane domain 1 106 IPR036640 GO:0005524|GO:0016020
Pste6g00995 879 Gene3D ABC transporter type 1, transmembrane domain 108 187 IPR036640 GO:0005524|GO:0016020
Pste6g00995 879 Gene3D ABC transporter type 1, transmembrane domain 409 422 IPR036640 GO:0005524|GO:0016020
Pste6g00995 879 Gene3D ABC transporter type 1, transmembrane domain 695 750 IPR036640 GO:0005524|GO:0016020
Pste6g00995 879 Gene3D ABC transporter type 1, transmembrane domain 462 678 IPR036640 GO:0005524|GO:0016020
Pste6g00995 879 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g00995 879 SUPERFAMILY ABC transporter transmembrane region 2 184 IPR036640 GO:0005524|GO:0016020
Pste6g00995 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 407 IPR027417 -
Pste6g00995 879 MobiDBLite consensus disorder prediction 411 426 - -
Pste6g00995 879 Pfam ABC transporter transmembrane region 2 102 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g00995 879 Pfam ABC transporter transmembrane region 498 672 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g00995 879 Pfam ABC transporter transmembrane region 108 186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g00995 879 Gene3D - 188 408 IPR027417 -
Pste6g00995 879 Gene3D - 751 879 IPR027417 -
Pste6g00995 879 CDD ABC_6TM_Pgp_ABCB1_D2_like 488 744 - -
Pste6g00995 879 SUPERFAMILY ABC transporter transmembrane region 479 745 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00995 Pste-Chr6 3990150 3999619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00995 1 879 Calmodulin-binding Proteins AT2G36910 35.639 0.0 577