Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00993 ATGAATGTGAAGGATGTGAAATATGTAATAAATTATGATTTCCCCGGGTCACTTGAGGACTATGTTCATCGCATTGGGCGGACTGGGAGAGCTGGTGCAAAAGGAACTGCATACACATTCTTCACAGCTGCTAATGCCCGATTTGCAAAGGAACTTATAGCCATTCTTGAGGAAGCAGGACAGAAAGTGAGTCCTGATTTAGCAGCAATGGGGCGTGGTGCACCACCTCCACCTTCAGATCTGAAGGGTGCCCGAGGTTTCCAAGACCGTGGGAGGGGTTATGGCAGCTCTCGTCCATGGAGCTGATTGAGGAAGGTGTAGATCACCATCAGGACGGTGGAAACTCCTATAATCACGACCTTTCTGTTACCACTGACATTTTATATTGTGTTGCTAATTATTGTAGACTTATAAGAGTAGTAATAGTAATTTAGTATTCTTGTTTTAAAATTTGTTTTGTTCAAATGTCCATAGAACATGTACTATCAGACAATTGTTCATAAATCATTTGTTCATACCACAATTCATTTTGCGGGAAACGAGGATAGCATAGTATTTCACAGTTTGTTATCCATATGATTTACGGATTGTTTTGCACA 599 0.4107 MNVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPDLAAMGRGAPPPPSDLKGARGFQDRGRGYGSSRPWS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00993 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 67 IPR027417 -
Pste6g00993 101 Gene3D - 1 72 IPR027417 -
Pste6g00993 101 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 70 - -
Pste6g00993 101 MobiDBLite consensus disorder prediction 65 101 - -
Pste6g00993 101 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 71 IPR001650 -
Pste6g00993 101 Pfam Helicase conserved C-terminal domain 2 32 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00993 Pste-Chr6 3985566 3986964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00993 1 52 Eukaryotic Initiation Factors Gene Family AT1G72730 44.231 6.35e-11 55.5