Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00988 atggaatacgcgtcttcttccttttcttcatcttccaaaccccaatggatgtatgatgtattcatgaattttaggggagaagacactcgtaagaactttgtttctcatctgtatgctgccctctcaaacgcaggagttaaaactttccttgatgaggagagttttcccaagggagtggggctgaaagaagaactcttcagatcaatagatgtatctcgcatatgtgtggttgtattctcaaaaaactacccttcatcttcttggtgtcttcaagagctggaaaaaatcattcaatgccacaaaacttatggccacagagttgtgcccatattttatggtgttgacccttccgatgttcgtcatcaaaagggtgcctttggaaattctttgcaagcatttgtggagaaaacatattgggaacaagatgttgaatctgcgttttccaggtggggctccatactcaccaaagctgcaaatttttctggttgggatgtcagtaaatattggccaagaaaggaatttggagggcagagtgagcatgttccatactggaatcctaacatgggccgaaatgaagtagtgctcgaagaggtgaccagaaaggtgcttgaagcagtgaccagagaggtgcttgaagcagtgattgaaaaggtgatcgaagtggtgagtggagcggagatcgaagcgacgattggagaggtgcggtggtggcgtgcacaactgttgtga 729 0.0 MEYASSSFSSSSKPQWMYDVFMNFRGEDTRKNFVSHLYAALSNAGVKTFLDEESFPKGVGLKEELFRSIDVSRICVVVFSKNYPSSSWCLQELEKIIQCHKTYGHRVVPIFYGVDPSDVRHQKGAFGNSLQAFVEKTYWEQDVESAFSRWGSILTKAANFSGWDVSKYWPRKEFGGQSEHVPYWNPNMGRNEVVLEEVTRKVLEAVTREVLEAVIEKVIEVVSGAEIEATIGEVRWWRAQLL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00988 242 ProSiteProfiles TIR domain profile. 16 206 IPR000157 GO:0007165
Pste6g00988 242 Gene3D - 11 223 IPR035897 -
Pste6g00988 242 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Pste6g00988 242 SMART till_3 17 160 IPR000157 GO:0007165
Pste6g00988 242 Pfam TIR domain 18 142 IPR000157 GO:0007165
Pste6g00988 242 PANTHER TMV RESISTANCE PROTEIN N-LIKE 11 168 - -
Pste6g00988 242 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00988 Pste-Chr6 3953891 3963044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00988 14 215 Miscellaneous Gene Families AT5G44900 31.527 2.01e-24 95.9