Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00987 AGCAATGGAGGAAACTCCTAAGCTCCTCCATGGAACTATTGAAGCTACCATCTTCAATGCCTCACCTTACTCACCTTTATTTCCCTTCAATTGTATATTTACAAATGGAAACCCTGCTTATGTGACTGTAAAAATAGACAACCAGAAGTTTGCAAAAACTAGCCAAGAAAGCAACCGTGTGTGGAATCAAACCTTTCAGATTCAATGTGCTCATCCAGCAGATTCATGCATCACTATTACACTGAAAACATCACGTTCTTCCGTATTGGGGAAGTTCCATATTCAGGCTCAGCAGCTACTGAAAAAAGGAGGTTTGATCAATGGTTTCTTTCCTCTCCTCATGGATAATGGAAAACCAAACCCAAAACTTAAATTGAAGTTTCAGTTATGGTTCAAGCCAGCACAATTGGAACCAGGTTGGGCAAAGATATTGAGCAATGACTGGGAATTTCAAGGGCTGAGGGAGACTACCTTCCCACTAAGGTCCTATTGTCAGGTCAAACTTTATCATGATGCTCACCATTCTTCTACTTTCCAACCCCCCTTTGATTTATGTGGAGCTCCAAAAAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTATTTAGTTTATATTGCAGGCTGGTCCTTCAATCCCATGATGGTTCTGGTTAGAGATCCTCACACAGAAATCCCACATGCCAGAGGAATAAAGTTAGGTGAATTATTGAAGAAGAAGGCAGAGGAAGGAGTGACTGTGAGGGTGATGCTTTGGGATGATGAAACATCTTTGCCCTTTGTTAAGAACAAAGGTATATTGAGCAACCAAGATGAGGAAGCTTTTGCTTATTTCAACCACACAAAAGTAATATGCAGAAAGTGTCCCAGATTACACCGTATGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACAGTGGACACAAAAGCACCCAAATCTATTGGTGACAGAGAACTTATGAGCTTTTTGGGTGGATTAGATTTGTATGATGGCAGATATGACACAGAGCAACATTCTTTGTTTCAAACACTCATTAGGGAGTCTCATTGTTATGACTTCTACCAAACAAGCATTGAAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGCACCTTGGCATGACGCTCATGCTTGTGTTACTGGTGAAGCTGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATCTGATCCTTCTTTTCTTGTCCCTTCTAGCACCTTGGCAAATCTTATGCCTAGGACAAGCTCAGGCACTGCTATAGATAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGATCATGTTTCAGTTGGTGAGTTGTCTACAAAGTTAACTGTGGAGAGGAGCATCCATGAGGCTTATGTTGAAGCAATCAGGCGTGCTGAAAGGTTTATATACATTGAAAACCAATATTTCATTGGGGGGTGCCATTGGTGGAAAAAAGATAGGCACTGTGGCTGCACAAATCTAATTCCAATTGAAATTGCACTCAAGGTAGTAAGTAAGATTAAGGCAAAGGAGAGATTTGCTGTGTACATAATCATACCCATGTGGCCAGAAGGTGAGCCAGACAGTGAACCTGTTCAGGATATATTGCATTGGACTAGAGAAACAATGGCAATGATGTATAGGTTGATTGGAGAAGCAATACAAGAAAGTGGGGAGCCAGGACACCCTCGAGACTACTTAAATTTCTTCAGTCTTGCAAATAGGGAGCAGAAGGGACAAGGGGAGTATCTTCCACCAGATTCTCCGCAGCCAGAAACTCAATACTGGAATGCCCAAAAAAGTAGGAGATTCATGGTTTATGTTCACTCCAATTTCATGATAGTGGACGACCTATACATATTGATAGGATCAGCTAATGTAAACCAAAGATCAATGGATGGGAAGAGGGACAGTGAAATTGCTATAGGATGCTACCAGTCTCAAGAAGGAGATGATAACCACCAAAAGAACCTAGATAATATTCAAGCATATAGAATGTCTGTATGGTATGAGCACACTGCTAGTGTTGATGAATTGTTCTTAGAACCAGAAAGATTGGCATGTGTGGAGAGAATGCGATCAATAGGAGATGAAATGTGGGAAATCTACAGCAGTGAAGAAATTGTGGACATGGAAGGTGTGCACCTTGTGACATACCCTGTGAGAGTAACACAAGAAGGGTATGTGAAGGATCTCCCAGATGGAGTTTATTTTCCTGACACCAATTCTCTAGTGAAAGGCAAAAGATCTAAAATATTGCCCCCTATCTTCACCACTTAGATACGAGGTTGAGTTACGAGCACACAAAAACAC 2323 0.4146 MEETPKLLHGTIEATIFNASPYSPLFPFNCIFTNGNPAYVTVKIDNQKFAKTSQESNRVWNQTFQIQCAHPADSCITITLKTSRSSVLGKFHIQAQQLLKKGGLINGFFPLLMDNGKPNPKLKLKFQLWFKPAQLEPGWAKILSNDWEFQGLRETTFPLRSYCQVKLYHDAHHSSTFQPPFDLCGAPKKLWEDVYKAIEGAKYLVYIAGWSFNPMMVLVRDPHTEIPHARGIKLGELLKKKAEEGVTVRVMLWDDETSLPFVKNKGILSNQDEEAFAYFNHTKVICRKCPRLHRMFPTLFAHHQKTITVDTKAPKSIGDRELMSFLGGLDLYDGRYDTEQHSLFQTLIRESHCYDFYQTSIEGASLNKGGPRAPWHDAHACVTGEAAWDVLTNFEQRWTKQSDPSFLVPSSTLANLMPRTSSGTAIDRNWKVQVYRSIDHVSVGELSTKLTVERSIHEAYVEAIRRAERFIYIENQYFIGGCHWWKKDRHCGCTNLIPIEIALKVVSKIKAKERFAVYIIIPMWPEGEPDSEPVQDILHWTRETMAMMYRLIGEAIQESGEPGHPRDYLNFFSLANREQKGQGEYLPPDSPQPETQYWNAQKSRRFMVYVHSNFMIVDDLYILIGSANVNQRSMDGKRDSEIAIGCYQSQEGDDNHQKNLDNIQAYRMSVWYEHTASVDELFLEPERLACVERMRSIGDEMWEIYSSEEIVDMEGVHLVTYPVRVTQEGYVKDLPDGVYFPDTNSLVKGKRSKILPPIFTT 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00987 761 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 128 IPR035892 -
Pste6g00987 761 SMART pld_4 298 335 IPR001736 GO:0003824
Pste6g00987 761 SMART pld_4 606 633 IPR001736 GO:0003824
Pste6g00987 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824
Pste6g00987 761 Pfam C2 domain 37 111 IPR000008 -
Pste6g00987 761 PANTHER PHOSPHOLIPASE D 7 743 IPR015679 -
Pste6g00987 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 298 335 IPR001736 GO:0003824
Pste6g00987 761 SUPERFAMILY Phospholipase D/nuclease 153 405 - -
Pste6g00987 761 Gene3D Endonuclease Chain A 176 421 - -
Pste6g00987 761 Gene3D C2 domain 31 131 IPR035892 -
Pste6g00987 761 PIRSF PLD_plant 4 761 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pste6g00987 761 Gene3D Endonuclease Chain A 422 671 - -
Pste6g00987 761 SUPERFAMILY Phospholipase D/nuclease 430 690 - -
Pste6g00987 761 Pfam Phospholipase D C terminal 679 750 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00987 Pste-Chr6 3952563 3956168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00987 30 761 Phospholipase D Gene Family (Wang group) AT1G55180 61.642 0.0 943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00987 6 3952563 3956168 Pste6g00987 6 3952563 3956168 ECH
Pste3g03559 3 28002127 28004819 Pste6g00987 6 3952563 3956168 PCT