Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00983 GCAAGTCACAACAACCATTAGCCATGAATTACATGATATTCTTACCACTAATTTCCTTTGTATACATATGCATCCGTATCATACTCTTAAGCCATAGCATAAAAAACACAAAATACCCTAGGCTCCCACCTGGTCCTCCCAGTTATCCCATAATCGGAAACATATTACAACTTGGTCCAACCAAACTACACCAAACACTTAATAAACTCTCAAAAACATATGGACCTATCATGTGTTGTCAAAATAGGCACTATCAACACTGTGCCAAAGAAGCCCTTCACAAAAAGGACCAAGCCCTAGCTAGTAGATTTGTACCTCACTCAGTGCAAGCACTTTCACATGATAAAGCTTCCATAGTGTTCTTACCCGTGTCAACAAAGTGGAAAACCCTTAGAAAAGTTTGTGCCACCAAAATTTTCTCACCCCAACAACTTGATTCAACCCAATCTCTTCGCCAAAACAAGATGAAAGACCTAATTGATTACTTGCACGAAATTTGCCTAAAGGGTGATGCTATTGATATTGGTGAGATTGCATTCACTACAGTGCTTAACTCAATCTCCAACACCCTTTTTCCCATTGACTTGGCTAGCTATAGTTCCAGTGTTTCTCAAAAGTTTAGGAGCGTTATTTCTTGTGTGCTTGCTGAAGCTTCAAAGCCTAACATTGCAGACTATTATCCTATTTTACGTAGACTTGATCCTCAGGGAGCACGAAGAAGGATGCAAAAGTATTACCAAATGCTAATTGATGTTTTTGATTGTATAATTGAAGAAAGGGTTCAAAGGGTAGATTCCATTGAAGGAAGTGATGTGTTAGACTCATTTCTCCATATCACACGAAAGGAAAATTCAGAATTAACACGTCATGATGTGGTACATTTGTTTCTGGACTTATTTGTGGCTGGGTTGGATACCACATCAGCTACAGTGGAATGGGTTATGACAGAGTTATTATGTAACCCAGAAAAATTATTAAAAACTAAGAAGGAGCTTGAACAAGTCCTCTGTCAAGATGAAGAACCTAATGATTCAGATATCTCTAAGCTTACTTACCTACAAGCCGTTGTGAAAGAAACCCTCAGATTGCACCCAACAGCCCCAATACTAGTTCACAAATCAATGGATGATATAGATATATGTGGCTTTAAGGTACCCAAAGATGCACAAGTTCTTGTCAATGTATGGAGCATGGGGCGAGATGAAAACATTTGGACTAACCCAACTTCATTTCTACCTGAAAGATTTGTGGAGAATGAAATGGATTTTAGAGTAGATGATTTTGGATTTATTCCTTTTGGATCTGGTAGAAGAATGTGTCCAGGCGTTCCACTAGCTAATAGGATTGTGCATTCCATGGTAGTAGATGGTGAAAAATCAAAAGACATGGACAAGGCTGAAATATTCAAAATTACTTTACACAAAGTCAAGCCTCTCAAGGCAATACCCACAAAAAATAACAAAAAATTGCTACCCAGAATGACTAAC 1487 0.3826 MNYMIFLPLISFVYICIRIILLSHSIKNTKYPRLPPGPPSYPIIGNILQLGPTKLHQTLNKLSKTYGPIMCCQNRHYQHCAKEALHKKDQALASRFVPHSVQALSHDKASIVFLPVSTKWKTLRKVCATKIFSPQQLDSTQSLRQNKMKDLIDYLHEICLKGDAIDIGEIAFTTVLNSISNTLFPIDLASYSSSVSQKFRSVISCVLAEASKPNIADYYPILRRLDPQGARRRMQKYYQMLIDVFDCIIEERVQRVDSIEGSDVLDSFLHITRKENSELTRHDVVHLFLDLFVAGLDTTSATVEWVMTELLCNPEKLLKTKKELEQVLCQDEEPNDSDISKLTYLQAVVKETLRLHPTAPILVHKSMDDIDICGFKVPKDAQVLVNVWSMGRDENIWTNPTSFLPERFVENEMDFRVDDFGFIPFGSGRRMCPGVPLANRIVHSMVVDGEKSKDMDKAEIFKITLHKVKPLKAIPTKNNKKLLPRMTN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00983 488 CDD CYP76-like 63 475 - -
Pste6g00983 488 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 Pfam Cytochrome P450 35 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 SUPERFAMILY Cytochrome P450 35 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Pste6g00983 488 Gene3D Cytochrome P450 21 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00983 488 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00983 Pste-Chr6 3927920 3933178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00983 5 477 Cytochrome P450 AT2G45550 41.000 4.42e-134 395