Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00979 CGGTAATTGAATTCTTGTGTTGGCATAAATAAATGCACATTTTTAATGTTGTCATCTTTAATCAATTTTGTTTATCGTTCTGGTTGTTGTTAAACTTGACTTTTCTTTAATCTGCAAAGCATAAGAAGCAAGAGAGTGGAGTATAAAAAATTGGAAGGGAAGTGGGGTGTGGAAGGAGGATCATCAATGGAGGATTATGAGTCGTTGATTGCAACCACTGACGTGGAGCTTCTGAAGCGAGCCTGGCGCAACGAGAAAGCCGCCCCTGAGATTCTCCGCTACCAATCTCATTTGATTTCCCGCGTCAAACAACAGATTCAACTCATGGAAGAAACTGTTGAGGAGAAATCCAGTGCCGGTACTAGTGATCCTCTTTCGGTCTCTCTCTATCAGATGGACTTGGATAGAACACTCTTCCTGTTAAGATCCTATTTCAGAATCCGCATCCAGAAGATTGAGAAGTACATGTTCCACATCTTTAAAACTGAAGAACTTTGGAACAGGCTATCTAAGTATGAAAAAGATTTTGCCACAATGTATACAGATGACCTCAAACAACATCTTGAGGATACTGTTCTATCAAAGTTGCCTGCAAATTACCGCTCTGTTCTGAGGCAATCTGAGATAAGTGAAGAGGATGACATGGTCCCAGAACCACAGCTAGACACATTTGTTTTGTGTAGAAGTAAAGAGTATCTCACGGGCATTCAACTCGAAGATGGACCTGTTGATGACAGGCAATTCTCTTATTCTTGGATTAATCTATTCTGCTCCTTTTTGAAAAAGGTTAAAATTAGTTCAATTCATTATTCTTGCAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTTCTGCACTTCATATGTTATAAATCAATAAAAGCGCTTGTAGAGAGTGGCAAAATTGATCTACTATGA 915 0.3978 MEDYESLIATTDVELLKRAWRNEKAAPEILRYQSHLISRVKQQIQLMEETVEEKSSAGTSDPLSVSLYQMDLDRTLFLLRSYFRIRIQKIEKYMFHIFKTEELWNRLSKYEKDFATMYTDDLKQHLEDTVLSKLPANYRSVLRQSEISEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRQFSYSWINLFCSFLKKVKISSIHYSCRSKLFEMEPGVLHFICYKSIKALVESGKIDLL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00979 242 PIRSF GINS_Sld5 1 242 IPR008591 GO:0006261
Pste6g00979 242 PANTHER SLD5 PROTEIN 3 242 IPR008591 GO:0006261
Pste6g00979 242 FunFam DNA replication complex GINS protein SLD5 1 188 - -
Pste6g00979 242 Gene3D - 1 232 - -
Pste6g00979 242 Coils Coil 37 57 - -
Pste6g00979 242 Pfam DNA replication complex GINS protein SLD5 C-terminus 194 242 IPR031633 -
Pste6g00979 242 Pfam GINS complex protein 54 112 IPR021151 -
Pste6g00979 242 CDD GINS_A_Sld5 12 131 IPR038749 -
Pste6g00979 242 SUPERFAMILY GINS helical bundle-like 9 141 IPR036224 -
Pste6g00979 242 SUPERFAMILY PriA/YqbF domain 194 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00979 Pste-Chr6 3915589 3918235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00979 3 162 Core DNA Replication Machinery Family AT5G49010 62.500 3.33e-63 194