Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00976 TTGTCTCTCAACCAACACTGATTTCTCTTTCAGGGTTGGCTTATCTGTTGTTAAAGCTTCCAACTTTGTTTCATTATGGCGTTTCTCTCTGCTTGCCTCGTATTCATATTTTAATGGGCAAGAGGCGTTTTGATTGAAGTTGGTTGCTCAGGCGTGTTTTCGCTGGAAATAAATTTTTTTAGAGAATCTGAAGACAATAATTGGTGAAAATTGAGGGTGAACTTTGGAGGAGGCAGAGAGCTAAATGACCCACGTATCTCTGGTCATATTTATGTGCCTATGAGGTTCAGGAGAGTTTGGATTGGATTGGTTTGCTTTCTGTGGAAATAGGAAGGACAAGATACTATTTATGCTGAGGAATCTTTTGTGGAGGCTTCCTTCTAAATGTTTTCGATAGTAGAGCCAAATAGTTGGATCCAAATCACACAACCCTTTACCTTTTTGAAGCAGCTTCTTTTCGACTCTTTTGACTTGGTAAGTGATTTGAAGGCACAACAGCTAGTGGAGTGAAGGGCCTCCTTTCAAATCTCTCATCAAGCTGCAAGCAGCAAGCAAAGCAGTTCTTTCACTGCTTTGAATCTTGTTCAATTTCAGAAAGCTTGAAATGCATTTTGCATTTTGAACTTGGGGCTGCTGCATCAACAACGTCTTGCTTTCTGATCCACAAAAGGGAATTGGCAACATATATGCTTTTGATGGTTGTTGAGAGTTGAATCTTTTGAGCAAGGTATTTTTTGTGGCATTATTATTGGTGCTGATGAGTCGAGAACGAGAACAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTCACTCATGTTGTTCAACCTGGAGATTGCATTACACTGTTAGTGGTTGTGCCTTCACAAAGTTCAGATATTGTTTTTCTGGCAAATTGTAAATATGATGATTCGATTCCTCTGATTCAGATGTGGCATGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGACTGTGCCAGCGGTATTAAGAAGTACCCTCCAGGAACAATCTCAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATTCTACAGCTTCATAACGTCTATGATCCAAACAAGATAAATGTCAGGATTAAAATTGTTTCCGGATCACCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCACAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAGGAAAAGCGATGCATGGAAGAACTGCAGTGTAACATTGTGGTTATGAAGCGTTCTCAACCGAAAGTACTGCGCTTAAATTTGATTGGACCACAAAAGAAGGACGTTGAAGAAGCAGGTCCATCACCTTCTGAGCAAGATGACATGCCTGAAAACCGAACCAAAATAAAGCTTGATTCCTTAAATTCTATCAAAGGACCTGCTGTAACTCCAACTAGCAGCCCAGAGCTAGGGACACCGTTCACCGCAACTGAAGGTGGTACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTCATCTCAGAGATGAATGGTGAGTCCAAAAAAGAGGAAACTATAAAGGAAAGTCAAGAACTTGGTGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCAGCAAGCATGAGATACCAGCCATGGATCACAGAATTGCTTTTACATCAACAATCATCACAAAGCAATGAAGAGAGATCAGAAAGGTCTCGTGGTATGCCTCAAGCATCTACAACCAAAGCTTTCCTAGAAAAGTATTCTAGGCTTGATAGAGGAGCTGGATTTGAAATCTCCACATATAGAAATGACTTGGATTTCAGTGGAAATTTAAGAGAAGCAATAGCACTATCTGGAAATGCCCCACCTGGTCCCCCTCCACTGTGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAGCCTCCAAGGTGGTTCAGTTATGCTGAATTAGAACTTGCTACTGGTGGATTTTCACAGGCCAACTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCACAGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATCTTGAATTTTGCTCGGAGGTGGAAGTCCTGAGCTGTGCTCAGCACCGGAATGTTGTTATGCTCATTGGGTTCTGTATAGAGGATAAGAGAAGGCTCCTGGTTTATGAGTATATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAAAGGGATCCATTGGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGTTTACGATATCTTCATGAAGAATGCAGAGTGGGCTGTATTATCCACCGTGACATGAGGCCAAACAACATTCTCATTACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTAGCAAGGTGGCAGCCCGATGGAGACACAGGTGTGGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCCGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTTACAGGTAGAAAAGCTGTGGATCTCACTCGGCCAAAGGGGCAGCAGTGCCTTACTGAGTGGGCCCGACCACTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCGAGGCTTGGTAACCACTATTCAGAACATGAGGTCTATTGCATGCTTCATGCTGCATCATTATGCATACAGCGAGATCCTCAATGTAGACCCCGCATGTCACAGGTTCTCCGAATACTAGAAGGTGACATGGTGATGGACGCAAATTACATCTCAACTCCAGGTTATGATGCAGGAAACCGGAGTGGTCGCCTTTGGTCAGAGCCGTTACAAAGACAGCACCATTATAGTGGTCCACTTCTGGAAGAGTCTCTGGAGTCCTTTAGTGGGAAGCTATCCCTTGACAAGTACAAGCCTTCCTATTGGGGAGATCGGGACAAACCTAGGAGGGCTTCATGTGAAGATGACATTTGAAGTGATTGATGATGAAAAATTGAAAATTGCATTCTTGTTATCCTAAAATATCTTTGTTCCCTACCTATTTTGTCGTCTTTTTATTCCTTTTTTTGTGCAATGGGATCTAATTTTGCATCTGTATAGCAGAGTGAAAGTAGGGATAGGTAAATATAGAAGAAGCTTTTGAAAAATTTTCAAGAAATCATGTAAGCTAATGCCAAAATGACCTTCACAGACTCGAGTGCTGTCTATGGTCTATTGATCTTCACTCTTCAACTTTCTCTCCCTCAGGCTCATCTATTACTTGGTTCAGGACTATCATGATCCCGTTCAATCTCCATATAACATGTAAACAAATTTTATTAACTTTTGTTTGTATAAGATAATAAACACATGAA 3459 0.4201 MSREREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSDIVFLANCKYDDSIPLIQMWHGRRLWGFPRFAGDCASGIKKYPPGTISEQKSDITDSCSQMILQLHNVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDVEEAGPSPSEQDDMPENRTKIKLDSLNSIKGPAVTPTSSPELGTPFTATEGGTSSVSSSDPGTSPFFISEMNGESKKEETIKESQELGDTNSDTESESLSTSSASMRYQPWITELLLHQQSSQSNEERSERSRGMPQASTTKAFLEKYSRLDRGAGFEISTYRNDLDFSGNLREAIALSGNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNHYSEHEVYCMLHAASLCIQRDPQCRPRMSQVLRILEGDMVMDANYISTPGYDAGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYKPSYWGDRDKPRRASCEDDI 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00976 773 MobiDBLite consensus disorder prediction 237 277 - -
Pste6g00976 773 Pfam Protein tyrosine and serine/threonine kinase 430 695 IPR001245 GO:0004672|GO:0006468
Pste6g00976 773 MobiDBLite consensus disorder prediction 279 296 - -
Pste6g00976 773 Gene3D Transferase(Phosphotransferase) domain 1 502 707 - -
Pste6g00976 773 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 398 501 - -
Pste6g00976 773 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 502 705 - -
Pste6g00976 773 ProSiteProfiles Protein kinase domain profile. 426 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00976 773 ProSitePatterns Tyrosine protein kinases specific active-site signature. 547 559 IPR008266 GO:0004672|GO:0006468
Pste6g00976 773 SUPERFAMILY Protein kinase-like (PK-like) 410 703 IPR011009 -
Pste6g00976 773 Gene3D Phosphorylase Kinase; domain 1 398 501 - -
Pste6g00976 773 PANTHER OS01G0750732 PROTEIN 284 704 - -
Pste6g00976 773 CDD STKc_IRAK 432 698 - -
Pste6g00976 773 MobiDBLite consensus disorder prediction 326 348 - -
Pste6g00976 773 MobiDBLite consensus disorder prediction 199 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00976 Pste-Chr6 3892310 3898368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00976 406 715 Trihelix Transcription Factor Family AT1G70460 51.562 1.87e-101 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pste6g00976 PK_Tyr_Ser-Thr 6.9e-41 CL0016