Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00967 atggaatttgcatcttcctcatcatcctcaaaatcgaaagccaaaaggctgtaccatgtgttcataaattttaggggaggagacactcgagggaagttcgtttctcatctccattatgccctctcaaaagctggggtcagcactttccttgatgaagagaacctgctcaaaggcaagaccttgaaagatgaactgatgcatgcaatagaagggtctcagatagcaatagttgttttctccaaaagctacactgagtctagttggtgtcttgaagagcttgaaaaaatccttgaatgccacaaactttatgaccaaatagttgtgcctatattttacaatattgatccatccgttgttagacatcaaaagggtgcttttggaaaagctttaaaagcagctgtggcaaaaaaatattcagaagaacttgtggaacaaatcctgtggaggtggggcaatgcactcaagagaactgcagatttctctggttttgatgcaagcaatcgctggtttttaaagcattttaaattgttttacattctgaatgaagctaaactagtgaaggaaattgttgacaaggttctccaatacctagtctttgaagagttgtatattactgactttcctgttggattagaatcccgtgtacaaaaagtgattggattaattgaaaatcaactcaacaaagtttgtatgatagggatatggggaatgggaggattaggtaaaactagcacagccaaaggaatctacaataaacttcatcgtaaattcattgataaaagtttcattgaagatattagagaaatttgtcaaatgaatggaagaggccatattcttctgcaaaaacaaattctgtcagatgtcctaaaaacacaggttgagatacttagtgttgggatgggcacaactactattaaggagagactttctggaaaaaagatgctcattgtacttgatgatgtgaatgagcttggccaagtagaaagcctatgtggaaatcgtgaatggtttggtgaaggaactataataatcattacaacaagagatgtacacatattgaaccaagttaaagttgattttgtatataaagtggaggaaatggacgaaaatgagtccctagaacttttaagttggcatgcttttagagaaccaaaaccaagagaagactttgttgaacttgcaagaagtgttgtttcttattgtggaggtctaccactggctcttcgggtcattggtgcttatttaactgagagaacaaaggaactgtggaaaagtgtattggcaaaactagaaaaaattccgaatgatcaagttcaaaaaaaattaagaataagctttgatggtttaagtgatcccatggaaaaggacatatttcttgatgtatgttgtttttttattggtaaagatagaagctatgttacacagatactaaatggttgtggactacatgctaatatcggaataacagttctcttagagcgtagtctcataaaagttgtaaagaagaacaaactaggaatgcatcctttgctacgagacatgggaagagagataatttgtgaaagttcaagaaacgaacctgggaagcgcagtcgactgtggtttccaaaggatgtacttaatgtattaaaaaataatactgggactgaagctacagtgggattgactttaaaattgcgatgcagtagtagagattgtttcaatgcctatgcttttgatgaaatgaagagtttgagacttttgcaacttgattatgtacaactcacaggaggttatgggtatctttctaagcaactgagatgggtcagttggcaagggtttccttcaaaatacataccaaacaattttaatttggatggtgtaattgcaatggatatgaaacacagtaatcttagattagtctggaaaaaaccacagattttgcagttcctaacaattctcaatcttagtcactccaagtacttgttagaaacgccagacttttcaggactacaaagtcttcaaaagctcattgtcaaagattgttcaaatttgaggaagggattggcaaatagtgagtcttgtaatgtttctcttccaggtgacaaacatccttattggttggcccatatgggtgagggacattcagtttacttcactgtacctgatgattgctgcatcaagggaatggttttgtgtgttgtttatttatcagaccctgaaaagacagcaaccgaatgccttgttagtgtcttaatagttaattacacaaagtgcagcatccaaatatgtaagcgagacacagtaatttcctttaatgatgtagattggcaaggcataatatcacatttggaacctggagacaaggtggagatttttgtgatttttgggcataaactggtggtcaagaagacagctatgtatctaatgtgtgatgaatcaattgagaggaaaatggtgccttctctgaagctaaagaaaaatgccattgtaagattcataaagaaaattgtaacgagtaagactcaataa 2511 0.0 MEFASSSSSSKSKAKRLYHVFINFRGGDTRGKFVSHLHYALSKAGVSTFLDEENLLKGKTLKDELMHAIEGSQIAIVVFSKSYTESSWCLEELEKILECHKLYDQIVVPIFYNIDPSVVRHQKGAFGKALKAAVAKKYSEELVEQILWRWGNALKRTADFSGFDASNRWFLKHFKLFYILNEAKLVKEIVDKVLQYLVFEELYITDFPVGLESRVQKVIGLIENQLNKVCMIGIWGMGGLGKTSTAKGIYNKLHRKFIDKSFIEDIREICQMNGRGHILLQKQILSDVLKTQVEILSVGMGTTTIKERLSGKKMLIVLDDVNELGQVESLCGNREWFGEGTIIIITTRDVHILNQVKVDFVYKVEEMDENESLELLSWHAFREPKPREDFVELARSVVSYCGGLPLALRVIGAYLTERTKELWKSVLAKLEKIPNDQVQKKLRISFDGLSDPMEKDIFLDVCCFFIGKDRSYVTQILNGCGLHANIGITVLLERSLIKVVKKNKLGMHPLLRDMGREIICESSRNEPGKRSRLWFPKDVLNVLKNNTGTEATVGLTLKLRCSSRDCFNAYAFDEMKSLRLLQLDYVQLTGGYGYLSKQLRWVSWQGFPSKYIPNNFNLDGVIAMDMKHSNLRLVWKKPQILQFLTILNLSHSKYLLETPDFSGLQSLQKLIVKDCSNLRKGLANSESCNVSLPGDKHPYWLAHMGEGHSVYFTVPDDCCIKGMVLCVVYLSDPEKTATECLVSVLIVNYTKCSIQICKRDTVISFNDVDWQGIISHLEPGDKVEIFVIFGHKLVVKKTAMYLMCDESIERKMVPSLKLKKNAIVRFIKKIVTSKTQ 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00967 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 460 IPR027417 -
Pste6g00967 836 SUPERFAMILY "Winged helix" DNA-binding domain 437 544 IPR036390 -
Pste6g00967 836 Gene3D Ribonuclease Inhibitor 548 692 IPR032675 -
Pste6g00967 836 SMART till_3 17 160 IPR000157 GO:0007165
Pste6g00967 836 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 198 - -
Pste6g00967 836 Pfam NB-ARC domain 213 439 IPR002182 GO:0043531
Pste6g00967 836 Gene3D - 15 201 IPR035897 -
Pste6g00967 836 PRINTS Disease resistance protein signature 662 678 - -
Pste6g00967 836 PRINTS Disease resistance protein signature 308 322 - -
Pste6g00967 836 PRINTS Disease resistance protein signature 401 415 - -
Pste6g00967 836 PRINTS Disease resistance protein signature 231 246 - -
Pste6g00967 836 Gene3D - 202 362 IPR027417 -
Pste6g00967 836 Pfam TIR domain 18 193 IPR000157 GO:0007165
Pste6g00967 836 ProSiteProfiles TIR domain profile. 16 197 IPR000157 GO:0007165
Pste6g00967 836 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Pste6g00967 836 Gene3D - 366 450 IPR042197 -
Pste6g00967 836 SUPERFAMILY L domain-like 557 683 - -
Pste6g00967 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 753 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00967 Pste-Chr6 3845782 3850568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00967 209 686 WRKY Transcription Factor Family AT5G45050 31.349 4.67e-68 244