Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00963 atggcttcttcttcctctaatcctcacctcatctgggacgtgttcttgagtttcagaggagaagacacacgtaagactttcgtgtctcatctctatgctgcactctcaaacgcaggaatcagcactttcattgatgacaagcttaacaagggaagtgagttaggagcagaactagtgcgacaaatagaagggtgtcgaatttccattgttgttttgtccataaactatgcttcttctaagtggtgtctcaatgagttggtcaaaatcatggaatgccgtacaacctacgggcaagtagttatgcccgtattttaccatgttgatccgtcagatgtacgtcatctgaggggtgattttggacaacgctttcaaaagattgtaccagaatgtttggaatgtttggaagggacaggtgaattgttggagagttggagtaatgtactcaaggaggctgcaaatttagctggatgggatgccagcaattggaggagtgaaggtgaactagtgaagcaaattgttgatgatgtttctggaaaactagacaccggattattgtctattcctgaatttgcagttgggttagaatcacgtgtgcaagaagtgattcaatttattaatgctcaatcaggccaaggtcgtgttgtagggatctggggaatgggtggcttgggtaaaacaactatggctaaagtcatcttcaatcagattcttctgagattcaagcatcatagtttcattgaaaatattagcgaaatttgtgagaaggataataaagggtttattgatttgcaagaacagtttctctctgatatcctaggtgatacatatgacaagatacatagcactgccatgggcacaactatgattgagagaagacttcgtggaataggtgctcttgttgtacttgatgatgtgacagattttaagcaattgaaagcactgtctataaatggtaaatggattgctcgaagagttgtgataatcattacaactagagatgtgcgcgtactaaatttacttaaagctgatcatacagtccatatttgtaaaataaaggaaatggacgaaaatgagtctcttaagcttttcagttggcatgcttttagacaaacacatccaagagaagcctttattaaactctcaaaggaagtagttgcctattgtggtgggcttccactagctcttgaaatccttggatcttgcttgtttgataggacaaaggaagaatgggatgatgtattgtcaaacttaaaggaaataccaaattatcaagtacaagagaagcttaaaataagctatgatcggttgaatcataaggaaaagaatatattccttgacatatgttttttctttattggcaaggacagagttgatgttgcaaagatactaaagggttgtgaactaggagctgaaattggaattacaatactggttgagagaagtctcataaagcttgataagaataataaacttaaaatacatgatttgctacgacacatgggaagagagattgttcgtcaaacttttcctgagaaacctgagaatcgtagtcgattgtgggttcaacaagaagtacttagtgtgttgttggaacatactactggaacagaagcaattgaaggcttgactttaaagttacaaagaactagtgaacttcatttcaatactaaagcatttgagcaaatgaagaaattgagacttttgaaacttgatcatgtacaacttgtgggggattatgtgtatcttaacaaaaacctaagatggttgctggggaaactaacgatcctcaatctaagccattcatgggacttgatgaacacccctgatttttcaaaattgccaaatctttcaaagttgattctcaaagattgtcaaagcttggtagaggtacacgaatccattggagatctaactaatattcttgtgataaatttgatgaattgtacaagtcttagccatcttccaatgagtatctatcggttgagatctttgcaaactctcaacatttctggttgctccaaaattgagaagttggaggatgatatcgtgcagatggaatccttgactacactgattgcaaaacatacagttataaaagaaattcctcgttcaatagtaagactgaaaaacattggatatatatccctatgtggacttgaaggattagcacttgaagtttttccttctctcatattgtcttggatgtcaccaagaggaaatattggatcctgtattcagccatctgggctcatgtcaacttctgtagtatccatggatatagtgcataataatttgtcgattgttggtagactttcaaaccatcgaagttcaggacactcagtacattttcaattgccagacgacagttattgtggtatgaagggattagttctgtgtgttgtttattcatcaacctttgaaaacagggcagttgaatgtcttatggatgtcttgctagttaattatacaaattacacccttcaaatatacaagggagacacaataatttcctttaacgacgaagattggcaaagtgtaatatcaaatctaagacctagtgacaatgtggagatttttgtagctcttgggcatgaattgactgttctgaagatagctgcctatctgatatatgatcaagaattcactatggaaatggagccatcacctatagtggatgtgcatccatcacctaatgtgatattggagccatcatccgaagtgaacctgcagccatcacatagtgtgatagtggagccatcactgaaggtaaatttgcagccatctcctagtgtgatagtggagctatcatctaacataaaaacagatccatcacctaatgttaaaatggatccattaccaaatatgaaatcagagctatccatgaagccaaagaaaaatatttttgcaagggttacaaagagagtgggaaaatgttcatgcatgagctaa 2949 0.0 MASSSSNPHLIWDVFLSFRGEDTRKTFVSHLYAALSNAGISTFIDDKLNKGSELGAELVRQIEGCRISIVVLSINYASSKWCLNELVKIMECRTTYGQVVMPVFYHVDPSDVRHLRGDFGQRFQKIVPECLECLEGTGELLESWSNVLKEAANLAGWDASNWRSEGELVKQIVDDVSGKLDTGLLSIPEFAVGLESRVQEVIQFINAQSGQGRVVGIWGMGGLGKTTMAKVIFNQILLRFKHHSFIENISEICEKDNKGFIDLQEQFLSDILGDTYDKIHSTAMGTTMIERRLRGIGALVVLDDVTDFKQLKALSINGKWIARRVVIIITTRDVRVLNLLKADHTVHICKIKEMDENESLKLFSWHAFRQTHPREAFIKLSKEVVAYCGGLPLALEILGSCLFDRTKEEWDDVLSNLKEIPNYQVQEKLKISYDRLNHKEKNIFLDICFFFIGKDRVDVAKILKGCELGAEIGITILVERSLIKLDKNNKLKIHDLLRHMGREIVRQTFPEKPENRSRLWVQQEVLSVLLEHTTGTEAIEGLTLKLQRTSELHFNTKAFEQMKKLRLLKLDHVQLVGDYVYLNKNLRWLLGKLTILNLSHSWDLMNTPDFSKLPNLSKLILKDCQSLVEVHESIGDLTNILVINLMNCTSLSHLPMSIYRLRSLQTLNISGCSKIEKLEDDIVQMESLTTLIAKHTVIKEIPRSIVRLKNIGYISLCGLEGLALEVFPSLILSWMSPRGNIGSCIQPSGLMSTSVVSMDIVHNNLSIVGRLSNHRSSGHSVHFQLPDDSYCGMKGLVLCVVYSSTFENRAVECLMDVLLVNYTNYTLQIYKGDTIISFNDEDWQSVISNLRPSDNVEIFVALGHELTVLKIAAYLIYDQEFTMEMEPSPIVDVHPSPNVILEPSSEVNLQPSHSVIVEPSLKVNLQPSPSVIVELSSNIKTDPSPNVKMDPLPNMKSELSMKPKKNIFARVTKRVGKCSCMS 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00963 982 Gene3D - 182 347 IPR027417 -
Pste6g00963 982 SMART till_3 11 154 IPR000157 GO:0007165
Pste6g00963 982 Gene3D Ribonuclease Inhibitor 508 796 IPR032675 -
Pste6g00963 982 ProSiteProfiles TIR domain profile. 10 180 IPR000157 GO:0007165
Pste6g00963 982 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 722 IPR044974 GO:0006952
Pste6g00963 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Pste6g00963 982 Pfam NB-ARC domain 195 428 IPR002182 GO:0043531
Pste6g00963 982 Gene3D - 11 181 IPR035897 -
Pste6g00963 982 PRINTS Disease resistance protein signature 214 229 - -
Pste6g00963 982 PRINTS Disease resistance protein signature 292 306 - -
Pste6g00963 982 PRINTS Disease resistance protein signature 388 402 - -
Pste6g00963 982 PRINTS Disease resistance protein signature 659 675 - -
Pste6g00963 982 Pfam TIR domain 12 181 IPR000157 GO:0007165
Pste6g00963 982 Gene3D - 353 437 IPR042197 -
Pste6g00963 982 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 157 IPR035897 -
Pste6g00963 982 SUPERFAMILY L domain-like 492 770 - -
Pste6g00963 982 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00963 Pste-Chr6 3824323 3829657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00963 12 728 WRKY Transcription Factor Family AT4G12020 28.302 1.50e-68 249