Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00954 atgtatttactccaggagaacgatgctgaactagtggagaaaattgttgacgatgttcttattatgctacactaccccttgcctattactaaatttcctgttggattagagtctcatttgaaagatttgattggatttattgagaatcaacgcaccaaagtatgtatgatcgggatatggggaatgggaggatcgggtaaaactactgtagccaaagccatctacaatcgaatttatcgttcattcatggataaaagtttcatcgaagatattagagaagtttatgaatcagatagagattggaatattcatttacaagaagagcttctttccaatgtcctcaaaacagacgtgatgatacatgacgttgagaatggagcagctatgatcataaacaaactctgcagaagaaagtcactcattgtccttgatgatgtgaataagttcgaccaattacgacacctatgcaaaaatcgtgaatggttcggtctgggaactgtaataatcattacaacaagagatgtacggctactatacacacttgatgttgattatgtttataaaatgaaagaaatggacgaaaatgagttccttgagcttttcagttggcatgcttttggagaagcaaaaccaagagaagacttcaacgaatttgcaaaaaatgtagttgcttattgtggaggactaccgctagctcttcaagtccttggttcttgtttatttgagcagacagagaaggagtggaaaagtgtattgtcaaaactagaaataagacccaatgatgaagttcaagagaaactaagaataagctttgattatttagatgctgagatgaaagatacatttcttgacatatgttgtttctttgttggtaaagacagagactatgttacagagatactaaatgcatgtgaactatttgctactattggaatagaggctctcatagagcgtagtcttataaaacttgaaaagaacaacaaacttggaatccatcctctgctacaagaaatgggaaaagagataattcgtgaaaattcacctgggaagcagagtcgaatgtggtttcataaggatgtaattgatgtattgaaagaagatactgggacagaagctattgagggattggtactgaaattgaatgtaaccaacaatgattgcttccaaacttctgctcttgagaaaatgaagtacttgagactattgcgacttgaccatgtacacctcactggagattataaatatctttccaagagactgagatggatctattggaaaggatttcctctaaaacacattcctaacgacttttatctgaaacgtgtacttgtgcttgaactaaaacacagtaatcttacactagtctggaaagaaccccaggttttgccacggctcaaaatcctcaatcttagtcactccaagtacttgaaagaaaccccagacttttctaaactaccgaatcttggaaaaatcattcttaaagattgtccaagtttgagcaaaatacacaaatccattggagatctccgtaaacttctattgataaatgttaaggattgtacaaacctaacaaatctccccaaagagttgtataagttgaaatctgtgaaaactcttaacatatctggttgtacaaagattgaaaaattggaagaagatatagtgcagatggaatctttaacaactctaattgctgaaaatactagggtgaaacaagtgccgttttcgattggattggaaactggtgaatcttgtgatgtttctctcaaaagtgacaatcatcctcattggttggcccatataggtgaaggccattcagtgtctttcactgtgcctgagaattgccgcataaagggaatgactttttgtggtgttgatatatttacccctgaaaagaaagcagctgaatgtcttattagtgtcttagtgggcataatgtcacatttggaatctgcagataatgtggagatttttgtgatttttgggcatagattggtggttaagaagacggctgtctatctaatgtgtgacagaaaaatggagatggctgcaaatttaccttatggctgcaggttcactttggatgatggctccattatgacattaggtgatggatgcgcatccattatagggggagaacctccaagaaatgactctgatgctcaagtcagagctcagatttcggcgaggctgaaatcctttgaggtagatggggaagtagggactttctcatctcgatactgcaatagtcagttgcatccaaatgcttggggctacatccaagcattccgagctttgtgtgtgtttactcatactcaggctacttacagcctgttccttcatcatttctctatttggcctcatgagaaatgtaaatgggtttccctgttttgcaaggccgataaccttttgtttgtgtcatacacaacttcttttaagggtttcaagtctgggtacttcaaagttatgataaatcctgtgttcctagagcaggcacaagtgctaggaaaacatatgtttgctgatgagctggtggaaagcaggaaagatagcttcttggctatcttggataagctgcgagagctggaagaaaatactaaaacgatgatcttccatgacgcacctgaggaggctttggccgcaagagatgtcgatcatgccaaggttttgactgagaaaaataagctcttggaggatgctcaagaagagccctttcggatggggaaactccacgagagtcatcatcatcagaagaaaatgctgagactcagtcaagagactcaagctaaagagactgctaacgtggatggggtcgaaggatcaaaaggccagagcaaagatgatgaagcagtcttttag 2859 0.0 MYLLQENDAELVEKIVDDVLIMLHYPLPITKFPVGLESHLKDLIGFIENQRTKVCMIGIWGMGGSGKTTVAKAIYNRIYRSFMDKSFIEDIREVYESDRDWNIHLQEELLSNVLKTDVMIHDVENGAAMIINKLCRRKSLIVLDDVNKFDQLRHLCKNREWFGLGTVIIITTRDVRLLYTLDVDYVYKMKEMDENEFLELFSWHAFGEAKPREDFNEFAKNVVAYCGGLPLALQVLGSCLFEQTEKEWKSVLSKLEIRPNDEVQEKLRISFDYLDAEMKDTFLDICCFFVGKDRDYVTEILNACELFATIGIEALIERSLIKLEKNNKLGIHPLLQEMGKEIIRENSPGKQSRMWFHKDVIDVLKEDTGTEAIEGLVLKLNVTNNDCFQTSALEKMKYLRLLRLDHVHLTGDYKYLSKRLRWIYWKGFPLKHIPNDFYLKRVLVLELKHSNLTLVWKEPQVLPRLKILNLSHSKYLKETPDFSKLPNLGKIILKDCPSLSKIHKSIGDLRKLLLINVKDCTNLTNLPKELYKLKSVKTLNISGCTKIEKLEEDIVQMESLTTLIAENTRVKQVPFSIGLETGESCDVSLKSDNHPHWLAHIGEGHSVSFTVPENCRIKGMTFCGVDIFTPEKKAAECLISVLVGIMSHLESADNVEIFVIFGHRLVVKKTAVYLMCDRKMEMAANLPYGCRFTLDDGSIMTLGDGCASIIGGEPPRNDSDAQVRAQISARLKSFEVDGEVGTFSSRYCNSQLHPNAWGYIQAFRALCVFTHTQATYSLFLHHFSIWPHEKCKWVSLFCKADNLLFVSYTTSFKGFKSGYFKVMINPVFLEQAQVLGKHMFADELVESRKDSFLAILDKLRELEENTKTMIFHDAPEEALAARDVDHAKVLTEKNKLLEDAQEEPFRMGKLHESHHHQKKMLRLSQETQAKETANVDGVEGSKGQSKDDEAVF 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00954 952 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 571 IPR044974 GO:0006952
Pste6g00954 952 Gene3D Ribonuclease Inhibitor 350 618 IPR032675 -
Pste6g00954 952 PRINTS Disease resistance protein signature 56 71 - -
Pste6g00954 952 PRINTS Disease resistance protein signature 133 147 - -
Pste6g00954 952 PRINTS Disease resistance protein signature 226 240 - -
Pste6g00954 952 PRINTS Disease resistance protein signature 460 476 - -
Pste6g00954 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 285 IPR027417 -
Pste6g00954 952 Gene3D - 13 185 IPR027417 -
Pste6g00954 952 Pfam NB-ARC domain 38 274 IPR002182 GO:0043531
Pste6g00954 952 SUPERFAMILY "Winged helix" DNA-binding domain 261 365 IPR036390 -
Pste6g00954 952 MobiDBLite consensus disorder prediction 924 952 - -
Pste6g00954 952 Gene3D - 191 275 IPR042197 -
Pste6g00954 952 SUPERFAMILY L domain-like 383 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00954 Pste-Chr6 3778390 3791138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00954 3 577 WRKY Transcription Factor Family AT4G12020 29.097 2.51e-63 232