Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00951 atggcttcatggccatgcacggagtggatccacgacgtgttcttgaactttagaggagatgacacgcgcaagggtttcatctctcatctctacgctgccctctcaaacgcgagaatcaacgttttcattgacgaaaagctgcttcaaaaaggaacggagttgggttcagaaatagtgcaggcaataagaaagtctcgcacctccgttgtggttttctcgcgtaactatgcttcatcgaggtggtgtcttgatgaactcgttgagatcttcaagtgccgtacaacttacggccacagggttgtgcccgtcttttaccacgtcgatccctcggaagtgcgttatcagaagggcgtgtttggagaacatcttgaagcccttgcacgtaaatgtttgctcagagagactctcgatttgtctaggagttggaggtctgtacttagggatgcggcaaatttgaacggttgggatgcaaggaatttcagaattgatatgacattttttaattggtga 510 0.0 MASWPCTEWIHDVFLNFRGDDTRKGFISHLYAALSNARINVFIDEKLLQKGTELGSEIVQAIRKSRTSVVVFSRNYASSRWCLDELVEIFKCRTTYGHRVVPVFYHVDPSEVRYQKGVFGEHLEALARKCLLRETLDLSRSWRSVLRDAANLNGWDARNFRIDMTFFNW 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00951 169 ProSiteProfiles TIR domain profile. 9 169 IPR000157 GO:0007165
Pste6g00951 169 Pfam TIR domain 11 146 IPR000157 GO:0007165
Pste6g00951 169 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 168 - -
Pste6g00951 169 SMART till_3 10 152 IPR000157 GO:0007165
Pste6g00951 169 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Pste6g00951 169 PANTHER TMV RESISTANCE PROTEIN N-LIKE 8 159 - -
Pste6g00951 169 Gene3D - 5 168 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00951 Pste-Chr6 3761476 3762208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00951 13 128 Miscellaneous Gene Families AT1G57830 44.828 1.69e-25 94.4