Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00949 atggggggattggggaaaacaactatggccaaagtcatgtacaatcgaattaataggaaattcagcaataaaagtttcgttgataacattagagaagtttgtaaaaaagatagtagggggcttatagatttgcaagaaggtcttctccgtgatgttcaaaaaacaaaggtcaagatacatagcattgcaatgggaataactatgatccaaagaagactttctggagaaaagaatctcattgtacttgatgatgtgactgaatttgagcaattgatagcactgtgtggaaatcgtagatggaatggtgtaggaagtgtaatcatcatcacaactagagatgtacacatactaaaggcccttaaagttgattatgtttatacattagaggaaatggatgaaaatcagtctcttgagctttttagttaccatgcttttggagaacccaaaccaagagaagatttcaatgaacttgcaagggacgttgttgcttattgtggaggactaccactagctcttgaagtccttggctcttatttatgtgaaagggtgaagaaagattgggaaagtgtattgtcaagactagaaacaattccttatgataaagttcaagagaaattaaaaataagttttgatggtttatgcaatcacatggagaaagaaatatttcttgatgtatgttgtttctttattggtaaaggcagagattatgttacaaagatactaaatggttgtggattatgtgctgatattggaataactgttctcatagaacgttgcctcataaaagttgaaaagaacaacaaacttgaaatgcatcctttgctacgagacatgggaagagaaataatctgtgacagttcaagagacgaacctgcaaagcgcagtagattgtggtttcaaaaggatgtacttgatgtattgacaacaaagaatattattgggacagaagctgttgtgggattggctctgaaattgcatttctgcagtagagattgcttcaatgcttgtatttttcaggaaatgaagaatttgagactattgcaacttgatcatgtacaacttacaggagattatgggtatctttctaagaaactaagatgggtacgttggcaaggctttccttcaaactacatacctaataattttaatttggaaggtgtaattgcaatggatttgaaacatagtaagcttatactactctggaaaacaccccagattttgccgtgcctaaaaatcctcaatcttagctactccaagtatttgacagaaactcctgatttttcaagattaccaagtcttgaaaaactcattcttaaaggttgttcaaacttgagaaagattgacaaattggaagaagatatagagcagatggaatctttaacaactttaattgctaaaaatactgatgtaaaacaagtgcccttttcaataaataatgatttggacaacttggggtcaatgcttagtaaccttcctaatcttcgaagtgttttggttcaatgtgacacagaatttgaactatttaaacagttaggaaccattttggatgatgcatatggtgtaaattttacaaaattggaaatgacatctgacacgtctcaactttcaaatcattacttgaagtcttatttgattggaattggaagttacaaagaagtcttcaatattctcaacagcagtatatcaaaggttccttctctttaccttactgtacttcactactttttaacttag 1734 0.0 MGGLGKTTMAKVMYNRINRKFSNKSFVDNIREVCKKDSRGLIDLQEGLLRDVQKTKVKIHSIAMGITMIQRRLSGEKNLIVLDDVTEFEQLIALCGNRRWNGVGSVIIITTRDVHILKALKVDYVYTLEEMDENQSLELFSYHAFGEPKPREDFNELARDVVAYCGGLPLALEVLGSYLCERVKKDWESVLSRLETIPYDKVQEKLKISFDGLCNHMEKEIFLDVCCFFIGKGRDYVTKILNGCGLCADIGITVLIERCLIKVEKNNKLEMHPLLRDMGREIICDSSRDEPAKRSRLWFQKDVLDVLTTKNIIGTEAVVGLALKLHFCSRDCFNACIFQEMKNLRLLQLDHVQLTGDYGYLSKKLRWVRWQGFPSNYIPNNFNLEGVIAMDLKHSKLILLWKTPQILPCLKILNLSYSKYLTETPDFSRLPSLEKLILKGCSNLRKIDKLEEDIEQMESLTTLIAKNTDVKQVPFSINNDLDNLGSMLSNLPNLRSVLVQCDTEFELFKQLGTILDDAYGVNFTKLEMTSDTSQLSNHYLKSYLIGIGSYKEVFNILNSSISKVPSLYLTVLHYFLT 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00949 577 Gene3D - 1 125 IPR027417 -
Pste6g00949 577 PRINTS Disease resistance protein signature 165 179 - -
Pste6g00949 577 PRINTS Disease resistance protein signature 72 86 - -
Pste6g00949 577 PRINTS Disease resistance protein signature 428 444 - -
Pste6g00949 577 SUPERFAMILY L domain-like 323 502 - -
Pste6g00949 577 Gene3D Ribonuclease Inhibitor 306 566 IPR032675 -
Pste6g00949 577 SUPERFAMILY "Winged helix" DNA-binding domain 200 307 IPR036390 -
Pste6g00949 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 507 IPR044974 GO:0006952
Pste6g00949 577 Gene3D - 130 214 IPR042197 -
Pste6g00949 577 FunFam Disease resistance protein (TIR-NBS-LRR class) 132 214 - -
Pste6g00949 577 Pfam NB-ARC domain 1 203 IPR002182 GO:0043531
Pste6g00949 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00949 Pste-Chr6 3751512 3755508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00949 1 497 WRKY Transcription Factor Family AT5G45050 27.881 1.92e-56 203