Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00943 atgtcccaactgtcaatcacctatcttgtcagtgtgcctcttcacctatcctggggaggacgtgcgtcgtcccacgatacacgagcctttgggacggattttgaggcatcgcaaggaccaagaggcatgaaccctcctcctaccccttcgtcttccgccttttcccctcctatatatacgcgtttggaagacatgggaagcattcttagttctcctgcttcttctactttttctgtaatcttaagaggcttttggcagactttggcacgacagttcatcgtgggtgtcgttatagagcctgggatgtccgatgcgacaattgtagaagtggtcccaatgatgtcgctggctgagacgaatagattaagagggaagatgctgatggcgagggacgggattaaggacgccatcatttacaaccatgtctgcgtggtggctaccatgtgtgttgtcccaagggaacgaggagcccttcactgttctatacaagatgttgttcacgagactcggcttcaggctttctctgaatggcttcgaaaaaagggtgtccaccaagaggttgagaaggcgatggtgaaatggttggaggcatcaggcttctatctgactaggatcgtgctcagaaaaaatggctctctcgatggaagagatgaagaaactatgggaggtcaagcagcacagcaatctttcgcagcaccatctgctgcggtcattacgacgccgatccctgaggctgggcctattgctactgaaggccatcttgagtcacgaaagtggctagatcaatgtgttaaccttaagcatgaggaaagtgtggaggtgccaaggcatcaccataggaagcaacatcccaaccatgttgagtacataataaaagagcgaacgatagggaaaaaagcaaccaaaggaaattgcaacgtagaaagacatatgaaattactagctaaaatagaaacggagggtagcaatgttccacgtgtgaggtatttggctatcatccaaggtttcgaggtggacaagatcaccttcgaagaagtggtgcgagtagactttggtgttgtttctgacttctgcttgttactttacggcgcactgcctcctttggtgagctcccacatttcgtcaatggagtataggttgactcatcattcgaggttggcctcctcggtgtggccgaggataggcagtgtagaagagaggttaatagtcgtgaagagaaaagaccttattgacctcggtagaggagctgcttggggatgtcagggttttctggatgatagatcagttgtggccaagtttctcggtgcttaccactttagaaagcagatcagcaggattgttttgttcgtggggaacatcatgcaagtcgaaatgggtgaagaaggttctagcctccttaatgcgctggagcgcctcgtactccgcttggttgttgctagtgttgaaggcgaaacacagggactgctcaatcatcaccctgtccgatccttcgaggattacccttgcgccacttcctttatgtctccccatttggagaaaaatcatgataggaaggcgatacatctggtgagagcttgtactttcttcacggttgacgggggtctcatgttcaggatcgccgagcatttgtcaagatttggttcaatccctctactagttagcatgaatccaaggaacttttccgctttgacattgaatgagcactttgttaggttgagcttcagagagcacttgtcgatggtggtgaagaattcctggaagtccacctcatgggtggaagcggttgctgacttgacaaccatgtcgtccaagaagacttccatgttgcagtcaattattgttgttgtaacccgatgtcgcgtctaccagtctgtcgatgctgggcagggggtaaggatccttcgggtagacttcgctaagatcagtgaagtctatgcacatgtgtcactaccctttttgcttacgaaccatgacgacgttagtgagccagctgggtggcaaatgaagtctgggtcgatcctgggcatgtcagtcgagctccatgcaaagacatgggcattgtgtcacagtacccaaacgatcgcggcctccacttctaagtctagcttcttaatcgacacagatgacctcgatgcgactaatgtcgaaggggacgtgatggacattatagcccatcattactgccgaaaatcacaatcgggtcatgtcgtgagggacaactcctgcctaatcctcatcagtgaaggacaaccccagggtcggggggcattccactctaggtgtcgagaccttgaggactactctaggggagaagacactcgtaagaatttcgtttctcatctctattcagccctctcaaatgctggagtcaacattttcctagatgaagtgaattttccaaagggagcggaactaaaagatgaattatttcgacagattgaaggatctcgcatatgtgtagttgttttctccaaaacctacactgaatcttcttggtgtcttcaagagttggaaaaaatcattgaatgctacaaagcttatggccaaatagttttgcccatattttatggtgttgacccttcccatgttcgtcatcaaagtggtgagtttggagaaactttgaaagcatttgctgaacaaagatcttggggagaatccatgctgtccaggtggagcactgtacttaatgaagcttcaaatttctctggatgggatgtcaccaatcacaggaacgaagctcaattagtcaaggaaattgttgaggatgttctcacaaaactagacaactcattcttgtctattactggatgtcctgttggattacaatctcgtgtaaaagaagtgattggattgattgaaaatcaaccaaccaatgtttgtataatggggatatggggaatgggaggattgggtaaaactaccttagccaaagccatctacaatcgaattcatcgtggattcatggatagaagtttcattgaagatattcgagaaatttgtaaaacagatcggatagggcatgttcatttgcaagaacaacttctttcagatgttcttaaaaccaaggtgaacataaaaagtgttgggatgggaagagctatgatggagagcaaactttccaagagaaaggcactcattatacttgatgatgttaatgagtttgaccaattaaaagacctatgtggaaatcgcaaatggtttggtgaaggaagtataataatcatcacaactagagatgtgcgcctacttaagagacttaaagttgatgatatctataaagtggaggaaatggataaaaatgagtcccttgagcttttcagttggcatgcatttaaagaagcaaaaccattacaagaattcaatcaacttgcaagaaaggtagttgcttattgtggaggactacctttagcccttgaagtccttggttcttatttaagtgaaaggacaaagcaagaatgggaaagtgtactatcaaagctaaaagtaattcccaatgatcaagttcaagagaaattacgaataagctttgatggcttagatgatcacatggaaaaggacatatttcttgatgtatgttgtttctttattggtaaagacagagcctatgttactgagatactaaatggttgtggactacatgctgatattggaataacaattctcatagagcgtagcctcataaaagttgaaaagaacaacaaacttggaatgcatgatttactacgagacatgggaagagagataattcgtagaagttcaacaaagaaactttgcaagcgcagtagattatggtttcatgaggatgtactaaatgtattgacaaataataatgggacaaatgctattgagggattggcactgaaaatggattcaagcagcagagataggtttaaatttaaagcatactcttttaagaaaatgcaaagattgagactattgcaacttgatcatgtagaacttattggagattatggggacctacctaagcagctgaggtggatccattggaaaaaatttcctttaaagtacatacctaacaacttttatctaggaggcgtaattgtgattgatttaaaacacagtgaacttagactagtttggaaagaaccccaggttatgccatgggtgaaaatcctcaatcttagtcattctatgcacttgaaggaaacccctgacttttcaaaactaccaagtcttcaaaagcttgttctcaaagattgtccaagtttgtacaaggtacaccagtccattggagatctacaaaatcttgtattgctaaatttgaaagactgtacaagtcttagcaatctcccaagagagacatacaagttgaaatccttgaaaactctcaacatatctggttgttcaaagattgaaaaattggaagaagatatagtgcagatggaatccttaacagctctaattgctaaaaatactgctatagaacaagttccattttcaatagttagatcaaaaagcatcggatacatatccttatgtggatatgaaggattatcacgtaatgtttttccttccatcattttctcttggatgtcaccaacaatgaatcccctatctcatattcgttcatatagtggctcttcatcttctatagtttccatggatatgcagaaaaataattttggtgatgtagcacctgtgcttagtagcctttcaaatcttcggagtgttttggttcaatatggcacggaatttcaactatctgaacaattaagaaccattgtggatgaggtatgtgatgtaaattctcctgaaaatgagttagaaataacatcatatacatcacaaatttcaaagcattcctgggagtcttatttgattggctttggaagttatgaagaagtcttgaacactctctgcaagggcatatctgagggattgacaaccagtaatgagtcttgtgatattcttcttcctggtgacaattatccttattggtcgtgtcataccggcgaaggacactcagtatgtttcactgtgcctgagaattatcacataaagggaataactttgtgtgctgtttatttatcaaccccagaaaacaagaggcctaactgtcctattaatatcttaattgttaattacactaagtgcaccatccagatttacaagcaagacacaataacctcctctaatgatgaagattggcaggccataatgtcacatttgggagctggagacacggtgaagatttttgtgacttctgtgcatgaattggtagtcaagcagactactatctatcttatgtatgatgattcaattgacatgaaaatggagctttcccctgagccaaagaaaaatgcctttgtaagattcatcaagaaaattgtaagactttccaaagaaaaatgtctttgtaagactgaagaatag 5394 0.0 MSQLSITYLVSVPLHLSWGGRASSHDTRAFGTDFEASQGPRGMNPPPTPSSSAFSPPIYTRLEDMGSILSSPASSTFSVILRGFWQTLARQFIVGVVIEPGMSDATIVEVVPMMSLAETNRLRGKMLMARDGIKDAIIYNHVCVVATMCVVPRERGALHCSIQDVVHETRLQAFSEWLRKKGVHQEVEKAMVKWLEASGFYLTRIVLRKNGSLDGRDEETMGGQAAQQSFAAPSAAVITTPIPEAGPIATEGHLESRKWLDQCVNLKHEESVEVPRHHHRKQHPNHVEYIIKERTIGKKATKGNCNVERHMKLLAKIETEGSNVPRVRYLAIIQGFEVDKITFEEVVRVDFGVVSDFCLLLYGALPPLVSSHISSMEYRLTHHSRLASSVWPRIGSVEERLIVVKRKDLIDLGRGAAWGCQGFLDDRSVVAKFLGAYHFRKQISRIVLFVGNIMQVEMGEEGSSLLNALERLVLRLVVASVEGETQGLLNHHPVRSFEDYPCATSFMSPHLEKNHDRKAIHLVRACTFFTVDGGLMFRIAEHLSRFGSIPLLVSMNPRNFSALTLNEHFVRLSFREHLSMVVKNSWKSTSWVEAVADLTTMSSKKTSMLQSIIVVVTRCRVYQSVDAGQGVRILRVDFAKISEVYAHVSLPFLLTNHDDVSEPAGWQMKSGSILGMSVELHAKTWALCHSTQTIAASTSKSSFLIDTDDLDATNVEGDVMDIIAHHYCRKSQSGHVVRDNSCLILISEGQPQGRGAFHSRCRDLEDYSRGEDTRKNFVSHLYSALSNAGVNIFLDEVNFPKGAELKDELFRQIEGSRICVVVFSKTYTESSWCLQELEKIIECYKAYGQIVLPIFYGVDPSHVRHQSGEFGETLKAFAEQRSWGESMLSRWSTVLNEASNFSGWDVTNHRNEAQLVKEIVEDVLTKLDNSFLSITGCPVGLQSRVKEVIGLIENQPTNVCIMGIWGMGGLGKTTLAKAIYNRIHRGFMDRSFIEDIREICKTDRIGHVHLQEQLLSDVLKTKVNIKSVGMGRAMMESKLSKRKALIILDDVNEFDQLKDLCGNRKWFGEGSIIIITTRDVRLLKRLKVDDIYKVEEMDKNESLELFSWHAFKEAKPLQEFNQLARKVVAYCGGLPLALEVLGSYLSERTKQEWESVLSKLKVIPNDQVQEKLRISFDGLDDHMEKDIFLDVCCFFIGKDRAYVTEILNGCGLHADIGITILIERSLIKVEKNNKLGMHDLLRDMGREIIRRSSTKKLCKRSRLWFHEDVLNVLTNNNGTNAIEGLALKMDSSSRDRFKFKAYSFKKMQRLRLLQLDHVELIGDYGDLPKQLRWIHWKKFPLKYIPNNFYLGGVIVIDLKHSELRLVWKEPQVMPWVKILNLSHSMHLKETPDFSKLPSLQKLVLKDCPSLYKVHQSIGDLQNLVLLNLKDCTSLSNLPRETYKLKSLKTLNISGCSKIEKLEEDIVQMESLTALIAKNTAIEQVPFSIVRSKSIGYISLCGYEGLSRNVFPSIIFSWMSPTMNPLSHIRSYSGSSSSIVSMDMQKNNFGDVAPVLSSLSNLRSVLVQYGTEFQLSEQLRTIVDEVCDVNSPENELEITSYTSQISKHSWESYLIGFGSYEEVLNTLCKGISEGLTTSNESCDILLPGDNYPYWSCHTGEGHSVCFTVPENYHIKGITLCAVYLSTPENKRPNCPINILIVNYTKCTIQIYKQDTITSSNDEDWQAIMSHLGAGDTVKIFVTSVHELVVKQTTIYLMYDDSIDMKMELSPEPKKNAFVRFIKKIVRLSKEKCLCKTEE 1797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00943 1797 Gene3D - 931 1091 IPR027417 -
Pste6g00943 1797 FunFam Disease resistance protein (TIR-NBS-LRR class) 767 929 - -
Pste6g00943 1797 Gene3D - 767 930 IPR035897 -
Pste6g00943 1797 PRINTS Disease resistance protein signature 1038 1052 - -
Pste6g00943 1797 PRINTS Disease resistance protein signature 1442 1458 - -
Pste6g00943 1797 PRINTS Disease resistance protein signature 961 976 - -
Pste6g00943 1797 PRINTS Disease resistance protein signature 1131 1145 - -
Pste6g00943 1797 ProSiteProfiles TIR domain profile. 760 927 IPR000157 GO:0007165
Pste6g00943 1797 MobiDBLite consensus disorder prediction 31 56 - -
Pste6g00943 1797 Pfam NB-ARC domain 945 1162 IPR002182 GO:0043531
Pste6g00943 1797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 931 1190 IPR027417 -
Pste6g00943 1797 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 769 1485 IPR044974 GO:0006952
Pste6g00943 1797 Pfam TIR domain 769 933 IPR000157 GO:0007165
Pste6g00943 1797 SUPERFAMILY L domain-like 1237 1565 - -
Pste6g00943 1797 SUPERFAMILY Toll/Interleukin receptor TIR domain 769 904 IPR035897 -
Pste6g00943 1797 Gene3D Ribonuclease Inhibitor 1295 1604 IPR032675 -
Pste6g00943 1797 Gene3D - 1096 1180 IPR042197 -
Pste6g00943 1797 SMART till_3 769 901 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00943 Pste-Chr6 3725395 3739748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00943 767 1488 WRKY Transcription Factor Family AT4G12020 28.993 6.96e-83 301