Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00942 atgtcttactctaaatctcccttctcaaaatcaaaaccccaatggagatacgatgtgttcatcaatttccggggtgaagacactcgtagaaacttcgtttctcatctctattctgcccttggaaatgctggagtcaacactttttttgatgatgatacgcttcctaaggggcaagaattatcagaactgttccaagcaatagaagagtctcaaatatccattgttgttttatcccaaacctacattagctctagatggtgtcttgatgaactggtcaaaatcatggaatgccatgcttttaaaggtcaacttgttatgcctatattttatgatattatcccttcttgcttgcgtgatccgcaagatatatctttccacgttatttgtgaccagtgcgatcagataaaactatggaagaaagcactatctcaagcagcaaatttagcaggatgggatgtgagaagatacagttgtgccaattgtcattatgggctgtcttttgtggcaaaagtacaaacatacggacgtgtcatctcagttggaggaaagcgcatggatgagctgacagggaatctttccattcccaacgtatcatctccttctctgcatccatgtgaattcatgcacgcttctccctcaactaagatgctgcctcttctttggactagtcaaaccacctttttaaatgaaaacgatgttatgaaggaaattgttggtgaagttttgaaaagactagataaaacatatatgtctatcaccaactttccagttggactagaatctcgtctgcaacatggtattagctttattagaaagcaaacaagaggaacttgtatattagggatttggggaatggggggaattggcaaaacaaccatagccaaatccatttacaatgaaattcgtcatgattttgaacataaaagtttccttggaagtattagagaagtttggggaagagataggggaccaactgatttacaagaacaacttctttcagatatccttaaaacaacaaaaaaggtgcatagcattgattggggaaaagagaagattaaggaaatcctacgcacaaaaaaagtacttgttatacttgatgatgtgaacaagtttgaacagctaagtgctctatgcggaaatcgtaatggaattggtgaaggaagtgtaataatcattacaactagagacatacgtctacttgatgagcttgaagttgataatgtacatggagtaaagaaaatgaataaaattgagtccattgagctattcagttggcatgctttcaggaaagcaaatccaaaaagggacttctttgaactctcaaagcaagtagtcgcttattgtggaggactaccattagctcttgaagttcttggatcttacttgtataagagaagtaaagaagagtggcaaagtgtattatcaaaactaaaagaaataccccatgataaaattcaagagaaattaaaaataagctatgatggtttagcagattatatggagaagggcatattccttgacatatgttgcttctttattggcatggacagagcttatgtcacagagatactgaatggttgtggacttcatgctgatattggaataacaatcctggtggaaaggagcctcataaaaattgaaaataataacaaacttggaattcatgatttgctacgtgatatgggaagagaaattgttcgtcaaagttcacctctagaaccacagaagcgcagtcgattgtgggttcatggtgatgcaattgatgtattgaaagaacaaattggaacagaagccatcgagggattggctttgaagttggaaagagctagcagaatttgcttcagagcccaaacattcgagaaaatgagaagattgaggcttttgaaacttgaaaatgtccaacttgctggagattatgagcatcttcccaaacacctgagttgggtctattggcgaggattttcattaaaatacgtaccccacaacttttatcagcaagatgtagttgctattgacttgaaacacagttatcttaaactagtatggaaagagcccatatcccagaagctggaaaggttaaaattcctcaatcttagtcattccaagtacttatcaaagactcctgatttttcaagactaccaaatcttgagaagctaattctcaaagattgtccaagcttgtctgaagtacatcattccattggagatctacaaacaacggacacatcacaagtttcagaaaattttatggtatctcgtttgattggaatggggagttaccaccatgtcatcgataagcttagcaatagcatatcagaggtcttgacaacccatagctcatgtgattttctccttccaggggacaattatccttattggttagcatatacaggggaaggatattcagtaccttttcaagtgcctgatgatagtgagtgttggatgaaggggatgactttgtgtggtgtttattcatcagcccctaaaagcatggcaattgaaagtcttgctagtgtcttcatctttaattacacaaagtgcacgatacatatgtacaagcaagcaccaattatgtcctttactgatgaagattggcagggcataatatcaaatctgggacctggtgacaatgtcgagatttttgtagcttttgggcatgaaatgactgttaagaaaacaggtgtctatctaatatatggtcagtcaataacaacaatggagccatcaactgaagtggaaattgagccttctgttattgttcggactgggtcaacaaataagccaaagaaaaatatcttttcaagaagtgcaaagaaaatgagaggctgtttatgtttgaactaa 2844 0.0 MSYSKSPFSKSKPQWRYDVFINFRGEDTRRNFVSHLYSALGNAGVNTFFDDDTLPKGQELSELFQAIEESQISIVVLSQTYISSRWCLDELVKIMECHAFKGQLVMPIFYDIIPSCLRDPQDISFHVICDQCDQIKLWKKALSQAANLAGWDVRRYSCANCHYGLSFVAKVQTYGRVISVGGKRMDELTGNLSIPNVSSPSLHPCEFMHASPSTKMLPLLWTSQTTFLNENDVMKEIVGEVLKRLDKTYMSITNFPVGLESRLQHGISFIRKQTRGTCILGIWGMGGIGKTTIAKSIYNEIRHDFEHKSFLGSIREVWGRDRGPTDLQEQLLSDILKTTKKVHSIDWGKEKIKEILRTKKVLVILDDVNKFEQLSALCGNRNGIGEGSVIIITTRDIRLLDELEVDNVHGVKKMNKIESIELFSWHAFRKANPKRDFFELSKQVVAYCGGLPLALEVLGSYLYKRSKEEWQSVLSKLKEIPHDKIQEKLKISYDGLADYMEKGIFLDICCFFIGMDRAYVTEILNGCGLHADIGITILVERSLIKIENNNKLGIHDLLRDMGREIVRQSSPLEPQKRSRLWVHGDAIDVLKEQIGTEAIEGLALKLERASRICFRAQTFEKMRRLRLLKLENVQLAGDYEHLPKHLSWVYWRGFSLKYVPHNFYQQDVVAIDLKHSYLKLVWKEPISQKLERLKFLNLSHSKYLSKTPDFSRLPNLEKLILKDCPSLSEVHHSIGDLQTTDTSQVSENFMVSRLIGMGSYHHVIDKLSNSISEVLTTHSSCDFLLPGDNYPYWLAYTGEGYSVPFQVPDDSECWMKGMTLCGVYSSAPKSMAIESLASVFIFNYTKCTIHMYKQAPIMSFTDEDWQGIISNLGPGDNVEIFVAFGHEMTVKKTGVYLIYGQSITTMEPSTEVEIEPSVIVRTGSTNKPKKNIFSRSAKKMRGCLCLN 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00942 947 Gene3D - 413 497 IPR042197 -
Pste6g00942 947 Gene3D - 246 409 IPR027417 -
Pste6g00942 947 Gene3D - 9 173 IPR035897 -
Pste6g00942 947 SMART till_3 16 148 IPR000157 GO:0007165
Pste6g00942 947 SUPERFAMILY "Winged helix" DNA-binding domain 483 591 IPR036390 -
Pste6g00942 947 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 151 IPR035897 -
Pste6g00942 947 ProSiteProfiles TIR domain profile. 15 146 IPR000157 GO:0007165
Pste6g00942 947 Pfam NB-ARC domain 271 498 IPR002182 GO:0043531
Pste6g00942 947 SUPERFAMILY L domain-like 604 733 - -
Pste6g00942 947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 776 IPR044974 GO:0006952
Pste6g00942 947 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 172 - -
Pste6g00942 947 Pfam TIR domain 17 171 IPR000157 GO:0007165
Pste6g00942 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 508 IPR027417 -
Pste6g00942 947 FunFam Disease resistance protein (TIR-NBS-LRR class) 415 497 - -
Pste6g00942 947 Gene3D Ribonuclease Inhibitor 588 779 IPR032675 -
Pste6g00942 947 PRINTS Disease resistance protein signature 448 462 - -
Pste6g00942 947 PRINTS Disease resistance protein signature 279 294 - -
Pste6g00942 947 PRINTS Disease resistance protein signature 688 704 - -
Pste6g00942 947 PRINTS Disease resistance protein signature 355 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00942 Pste-Chr6 3716074 3722898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00942 257 727 WRKY Transcription Factor Family AT5G45050 32.056 8.13e-62 227