Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00940 atgtcttcatcatcatcatcgtcgacggtgaaaccccaatggatctacgacgtgttcataaacttcaggggaggagacacgcggcggaacttcgtgtcgcacctctactacgccctctcgaacgccggagtgaacacgttcttcgacgaggagagtctcctcaagggaatgcagctccacgagctcacacgcgccatcgaggcgtcgcagatcgccatcgtcgtattctcggaaacctacgccgactccacctggtgcctctccgagctcgagaagatcatcgactgccacgaatcccacggccagatcgtcgtccccatcttctacgacgtggaccccaccgttgtcaggaactccactggtcgctttggggaagctctccaggctgctgctgacaagaagtattctcatgagcatatggagtatagcttgtctagatggaagactgccttgtataaaggggccaatttctctggttgggatgtcaggaatcatagcaataaagctaaactagtgcaggaaattgttgaggacattctcactaaactagactatgcactcttgtctattaccgaatttcctgttggattggaatcccgtgtgcaagaagtgattggagttatagaaaatcaatccaccaaggtctgtttcataggaatatggggaatgggaggatccggtaagactactattgccaaagccatctacaatcaaattcaccgtagattcatggataagagtttcattgaaaatattagagaagttagtgaaacacaaggtagagggcatgttcatttacaggaacaacttctttctgatgtcctaaaaacaaagttgaagatacgtagtgttgggatgggaacaactatgattgatagcagactttctggaaaaagggcactcattgtacttgatgatgtcagtgagtttggtcaattaaaagatctatgtggaaattgtaaatggtttggtgaaggaagtgtaataatcatcacaactagagaccgacgtttgcttgatctacttaaagttgattatgtttatgagatggataaattggatgaaaatgagtcccttgagctttttagctggcatgcttttagagaagcaaaaccaagagaagacttcattgagcctgcaagaaacgtagttgcttattgtggagggctaccactagctcttgaagttcttggttcttatttaactcagaggacaaagaaagattgggaaagtgtattatcaaaactagaaagaattcccaatgatcaagttcaagagaaattaagaataagctttgatggtttaagtgatcacatggaaaaggatatatttcttgatgtatgttgtttctttattggtaaagacagagcctatgttacagagatactaaatgggtgtgggctacatgctgatattggaataactgttcttatagactgtagtctcttaaaagttgaaaagaacaacaaacttggaatgcatcaattgctacgggatatgggaagagagataatatgtgaaagttcaagaaaggaacctggtaagcggagtcgattgtggtttcatgaggatgtaattgatgtattgacaaagaactcagggactgaaactattgagggattggttctgaaattgcatttcactggcagagattgtttcaaagctaatgcttttgaggaaatgaagagattgagactgctgcaacttgatcatgtacaactaactggacattatgggtatctttctaagcaattgagatggatttgttggcaagggtttccttcaaaatacattcctaaaaacttttgtatggaaggtgtagttgcagttgctttaaaacatagcaatcttcgactattctggaaagaatcccaagttttgggacagctaaaaattcttaatcttagtcactccaagtacttgagaggaacccctgacttttcaaaactaccaagtcttgaaaagctcatcctcaaagattgcccacgtttgtgcaaggtacacaagtccattggagatctctgcaatcttcttcttataaatttgaaggactgtacaagccttgacaatctaccaaagggagtttataaattgaaatctgtaaaaactctcatcctttcgggttgttcaaagattgacaaattagaagaagatatagtgcagatggaatccttgacaactttaattgctgaaaacactggtcttagacaagtgcccttttcaataataaactcaaaaagcattggttatatatccctatgtggatatgaaggattatctcgtaatgtttttccttctatcattcggtcttggatgtctccaacgatgaatcccttagcttatattcatccaggttgtaacacatcatcatatctagtttccatggatatgcaaagttttattttgggtgatcttgcaccaatgcttaacagcctttcaaatcttcgaagtcttttggtgcaatgtgacacggagtctcaactatctagacaagttaaaacaattctgggcatctatggtgtaaattttacagaattggaaacatcacaaatttcagagcattacttgaggtcttatttgattggtattggaagttatcaagaagtcttcaatactcttagagatagcatatttgagggattgaaaacaaccagtgagtcttccgatgtttttctcccagttaacaatgacccttattggttggcccatatgggtgagagacattcagtgtatttcaaagttcctgaggattctcgcatgaaagggatgactttgtgtgtagtttacttatcaacacctgaaactgcaacacctgaaaacatggcagctgactgtcttattagtgttttaatgggcatattatcacatttaggacctggagacaaggttgagatttatttgatttttgggcatgaattggtggtcaagaagacagctgtctatctaatgtgcgatgaatcaattgtaaaggaaatggacccttctcctgaaccaaaggaagagacaaagaaaaatgctttccaaaaattcataaataaatttgcaatgtataataagaatcaaaagtag 3069 0.0 MSSSSSSSTVKPQWIYDVFINFRGGDTRRNFVSHLYYALSNAGVNTFFDEESLLKGMQLHELTRAIEASQIAIVVFSETYADSTWCLSELEKIIDCHESHGQIVVPIFYDVDPTVVRNSTGRFGEALQAAADKKYSHEHMEYSLSRWKTALYKGANFSGWDVRNHSNKAKLVQEIVEDILTKLDYALLSITEFPVGLESRVQEVIGVIENQSTKVCFIGIWGMGGSGKTTIAKAIYNQIHRRFMDKSFIENIREVSETQGRGHVHLQEQLLSDVLKTKLKIRSVGMGTTMIDSRLSGKRALIVLDDVSEFGQLKDLCGNCKWFGEGSVIIITTRDRRLLDLLKVDYVYEMDKLDENESLELFSWHAFREAKPREDFIEPARNVVAYCGGLPLALEVLGSYLTQRTKKDWESVLSKLERIPNDQVQEKLRISFDGLSDHMEKDIFLDVCCFFIGKDRAYVTEILNGCGLHADIGITVLIDCSLLKVEKNNKLGMHQLLRDMGREIICESSRKEPGKRSRLWFHEDVIDVLTKNSGTETIEGLVLKLHFTGRDCFKANAFEEMKRLRLLQLDHVQLTGHYGYLSKQLRWICWQGFPSKYIPKNFCMEGVVAVALKHSNLRLFWKESQVLGQLKILNLSHSKYLRGTPDFSKLPSLEKLILKDCPRLCKVHKSIGDLCNLLLINLKDCTSLDNLPKGVYKLKSVKTLILSGCSKIDKLEEDIVQMESLTTLIAENTGLRQVPFSIINSKSIGYISLCGYEGLSRNVFPSIIRSWMSPTMNPLAYIHPGCNTSSYLVSMDMQSFILGDLAPMLNSLSNLRSLLVQCDTESQLSRQVKTILGIYGVNFTELETSQISEHYLRSYLIGIGSYQEVFNTLRDSIFEGLKTTSESSDVFLPVNNDPYWLAHMGERHSVYFKVPEDSRMKGMTLCVVYLSTPETATPENMAADCLISVLMGILSHLGPGDKVEIYLIFGHELVVKKTAVYLMCDESIVKEMDPSPEPKEETKKNAFQKFINKFAMYNKNQK 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00940 1022 Gene3D - 189 346 IPR027417 -
Pste6g00940 1022 SMART till_3 15 157 IPR000157 GO:0007165
Pste6g00940 1022 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 185 - -
Pste6g00940 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 446 IPR027417 -
Pste6g00940 1022 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 776 IPR044974 GO:0006952
Pste6g00940 1022 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Pste6g00940 1022 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 160 IPR035897 -
Pste6g00940 1022 Gene3D - 10 188 IPR035897 -
Pste6g00940 1022 PRINTS Disease resistance protein signature 294 308 - -
Pste6g00940 1022 PRINTS Disease resistance protein signature 217 232 - -
Pste6g00940 1022 PRINTS Disease resistance protein signature 387 401 - -
Pste6g00940 1022 PRINTS Disease resistance protein signature 696 712 - -
Pste6g00940 1022 SUPERFAMILY L domain-like 510 856 - -
Pste6g00940 1022 Gene3D Ribonuclease Inhibitor 543 885 IPR032675 -
Pste6g00940 1022 Pfam NB-ARC domain 199 421 IPR002182 GO:0043531
Pste6g00940 1022 Pfam TIR domain 16 186 IPR000157 GO:0007165
Pste6g00940 1022 Gene3D - 352 436 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00940 Pste-Chr6 3707973 3714936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00940 16 744 WRKY Transcription Factor Family AT4G12020 30.493 5.78e-83 293