Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00916 GCCCAACCGAAAAGTATACGGATAATTGGGTCGGACTCCCCGACCCGATTTCATCAATTTGAGATTAGGGTTTGTTGCTTCTATATATAAGGTGTGATGCAAAACCCTAGTGGTGAGTTGCGGACGAAGGAGAAAATGGCGACAGTTCCAGGGCAGCTGGTGTGGGAGATCGTGAAGAAGAACAACTCTTTCTTGGTGAAACAGTTCGGAAGAGGCACTCAGAGCGTTGAATTCAGCAGAGAGTCCAACAATCTCTATAACCTCAATTCATTCAAATACTCTGGTTTGGCAAACAAGAAAAGTGTGACCATTCAGCCTGTGGGTAAAGATCTGTCTGTGTTGTTGGCTACAACCAAGACGAAGAAGCAAAACAAGCCTGCTTCATTGCTTCACAAATCTGTGATGAAGAAAGAGTTCAGGAGGATGGCAAAGGCTGTTGAAAATCAGGTGGCAGAAAATTACTACAGGCCTGACCTCAAGAAGGCTTCCCTTGCAAGATTAAGTGCTGTTCAGCGAAGCCTGAAAGTTGCCAAGTCTGGTGTTAAGAAGAGGAATAGACAAGCCGTTAGGGTCCCTGGTAGGAAGTGAAAGGGAACGAAGAAGAGTTAGATTGCATTCAACCCTCGTTTTGCCCCTTTTTTGTGGTTTTTTTAGAACTTTATCCTCGATTTCCTCAGTTGTTTTGAATGCAATCATTTAAAGTATTCAGTATGGAATTTGAACTGGCATTTTATAGCTTTTAACTTTATTGATTTCTGTGTTGGTATAATCGCCTTATGGTGGTTGTTTTAAATTCAAGTGACAAAATAGCATATTTTTGCATTGAAGGATGGATGGTAACTGTTTTTGGCTATTGAAAATATATTTTTATTTAGTTTCCTTCGGTCCTTCTGGCATTATGAAAGCTGTTGTATAGAGAGCTTGAACTCAAAGTTGGTTCAAGGATTCTGGTGGGTTGATATTTGGGGAACATGTGTAAATGTTTTATCTAGTTTGGTGAACATATTTAGGATAGTCACCATGAAAGAACCCGACCGCCGTGCTTGTTTTGAGAGAGTAATTATAATCTTGGCACCTCAATCAGTTTGCAAGATGTAATAAAGGTTTTGTCATTTTGCTCTACCTAAAAGCAATTTATTCACATTAAAGGAGAAAATGGCAAATATCTTAACTTGTACCATCTTTGGTGTTTGCTAAACTAAATTGCAC 1209 0.397 MQNPSGELRTKEKMATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSGLANKKSVTIQPVGKDLSVLLATTKTKKQNKPASLLHKSVMKKEFRRMAKAVENQVAENYYRPDLKKASLARLSAVQRSLKVAKSGVKKRNRQAVRVPGRK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00916 163 PANTHER 60S RIBOSOMAL PROTEIN L28 14 162 IPR002672 GO:0003735|GO:0005840|GO:0006412
Pste6g00916 163 Pfam Ribosomal L28e protein family 21 141 IPR029004 -
Pste6g00916 163 FunFam 60S ribosomal protein L28 18 146 - -
Pste6g00916 163 Gene3D - 19 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00916 Pste-Chr6 3591483 3594108 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00916 14 156 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 71.329 6.99e-74 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00916 6 3591483 3594108 Pste6g00916 6 3591483 3594108 ECH