Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00913 TTCTCAAAACCAAGAGGTATCATGGGTGATGGAGAATGGTGGGAACAACAACGTTGTGAATGCGTTGTTGAACAAGGAAATGAGACATGGAAGAACTGCACATATCCTTTCTTCTTCTTCTTTGCGCAAGAAATCTGATCTAACTATTGTGTCTAAGGTTAGTTCTGGCCTCATCAGAGGTGTGTTGGAGAATGTGCAAGAGGTTATTCTGGGAACCAAGCTCTCTATTTTGTTCATAACTATTCCCCTTGCAATAGTTGCTCAATGCTTTGGCTTTGGTAGACCATGGGTTTTTGCTTTGAGCTTGCTTGGGCTTACCCCACTTGCTGAACGAGTCAGCTTCTTGACAGAGCAGGTTGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAACAATAACAAAATTGCTGTGGTCAAGTACTCTTTGCTTGGTTCCATCATTTCTAACCTTCTTCTTGTTCTTGGAACCTCTCTATTATGTGGTGGCATTACAAATCTTAGAAAGGAGCAAAAATACGATAGAAGACAGGCAGATATCAACTTGCTTATGCTGTTTGTGGCATTGCTTTGTCACTTGCTGCCATTGTTGTTCCAATATGTTGGTACCTCAGCAGGTGACATTGCAGACTCATCTCTGCGGTTGTCAAGAGTTGCTAGCATTATTATGCTGATTGCATATTGTGTATACCTTGTCTTCCAACTGTGGACTGACAGGCAGTTATTTGAAGCCCATGATGAAGACGATGAAGAGGGTGACAATGATTTAGAAGAAGTAGTGATAGGATTCTGGAGTGGAGTGGCTTGGCTGCTTGGGATGACTGTGATTATTGCTGTGCTGTCTGAGTATGTAGTGCAAACAATTGAGGATGCATCCGATTCATGGGGTTTGTCTGTTAGCTTTCTCAGCATAATCTTCCTTCCAATAGTTGGGAATGCAACTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATTTCCTTAGGTGTTTCCTTAGGTTCCTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTCTTGGAATCAGAATGGACCTCAACTTCAACCTCCTAGAGACAGGTTCTCTTGCTTTGGCAATAATAATCACAGCCTTCACCTTACAGGACAGGACTTCTCACTACATGAAAGGCCTTGTTCTCGTACTCTGCTACATTGTTATTGCTGCATGCTTT 1276 0.4232 MENGGNNNVVNALLNKEMRHGRTAHILSSSSLRKKSDLTIVSKVSSGLIRGVLENVQEVILGTKLSILFITIPLAIVAQCFGFGRPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALNNNKIAVVKYSLLGSIISNLLLVLGTSLLCGGITNLRKEQKYDRRQADINLLMLFVALLCHLLPLLFQYVGTSAGDIADSSLRLSRVASIIMLIAYCVYLVFQLWTDRQLFEAHDEDDEEGDNDLEEVVIGFWSGVAWLLGMTVIIAVLSEYVVQTIEDASDSWGLSVSFLSIIFLPIVGNATEHAGAIIFAFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWILGIRMDLNFNLLETGSLALAIIITAFTLQDRTSHYMKGLVLVLCYIVIAACF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00913 416 NCBIfam calcium/proton exchanger 52 416 - -
Pste6g00913 416 FunFam Vacuolar cation/proton exchanger 116 260 - -
Pste6g00913 416 NCBIfam calcium/proton exchanger 68 416 IPR004798 GO:0006816|GO:0015369
Pste6g00913 416 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 416 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste6g00913 416 FunFam Vacuolar cation/proton exchanger 261 416 - -
Pste6g00913 416 Gene3D - 116 259 IPR044880 -
Pste6g00913 416 Gene3D - 261 416 IPR044880 -
Pste6g00913 416 Pfam Sodium/calcium exchanger protein 275 413 IPR004837 GO:0016020|GO:0055085
Pste6g00913 416 Pfam Sodium/calcium exchanger protein 87 244 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00913 Pste-Chr6 3559885 3563597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00913 2 416 Antiporters AT2G38170 68.258 0.0 555