Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00908 TACACTTCCATACTGCGCAGATAAGATGAAAGGAGAAACACAATGGACTGTCATCTTAAACGTATGGGCATGCGTTGTATTGGTTTCGGTTTTCATTATTCATACCAATTCAGCACTAGAGAAACATGTTGCAAGAGAAATGGTGACTAACAATAACACACCACCTGGTTTCATAAACATTGATTGTGGATCAGATATAGCTTATGCGGACCCGGATACAGGATTTTGGTATGAGACAGACAATGGTTTTGTTGAAACAGGAACCAATCATATGGCTTCTCCGAATGCGAACTTAGGTAGGTATCGCGATTTTGGGAAACAGTTGACCACACTAAGATGCTTTCCAGAAGGAGAGAGGAACTGTTACAGCCTGAAGCCAGAACTGGGCAAAAATAATAGCAAATATCTCATTAGGGCTATGTTTTCATATGGAAATTACGATGGCAAAAATCAAGGCCCTTCTTTTGAGGTGTACATTGGAGTCAATCTAGTGGACAAAATTGACCTAGCTGGTTATGGTTACCACAACCTGGAGGTTATTCATAGTCCTTCGGGTGAAAGTAAAAGTATAGAAGTGTGCCTGCTAAAAAGTGGCCCCACAGTCCCATGCATTTCTTCATTGGAACTACGCCCTTTAAACAGTTCCATTTATTCAACTCCCATTGTGTCCACAGCTTCTACTCAGCCGCTACTATGCCTTGAGCTTAGGAAAGATGATGTGTATGATCGGATGTGGCGGTGTGACATAAATGGTACGAAGGATTGGTATCCTTTGGAGATGGATTTGGCTAACTTTAACAATGGAAGCAGTGATTATAAGTTGCCCTCCTCAGTACTCAAAACTGCAGTCGAATCGTTGAATGTCTCTGAGCCATTACAATTTGACTTTAACTTACTCTTTTACTCACTGGACAATACTTTTGAGTACATGGTGTATTTTCACTTTGCTGAAATTAAGAAACTTCCTAATGGACAAAAAAGAATCATCAATGTCACCTTTAACTATGATGCCATCCTCCCTAGCCCATTGGTTCTTGAATACCTTAAGCCAGTCACCATTAGTCATCTTCAAAGAAATCCGGGCGTGGTTTTGTTTAACATTAGTGCCACGCCAAAATCGTATGCTCCACCTATCCTCAATGCATTCGAGATTCATAAGTTGATACCACAACTTGATTCCCCAACACACGCTGCAGATGTTGGTGCTATTGTGAACATCAAAAGCGTGTACCAGATCTCTAGACTGAATTGGCAAGGGGACCCATGTGTTCCAAAGAAACATGCATGGGACGGTCTTGTTTGTAGGTCCTATGACACCATTCCGAGGATCATATCTTTGAATTTGAGCTCAAGCAAACTGACTGGGGAGATAAGTATATCATTCACAAACCTTACAGAACTTGAAATCTTAGATTTGTCGCTTAACCAATTGGAAGGACCTTTGCCAGAATTTCTAGCAGAATTGCCAAAGTTGAAAATTCTTAACGTCACTGGGAACAAGCTTTCGGGTTCAATTCCTGAGGTTCTCAAGGGAAAAGCAAATTTGCAATTAAGTGCGGGGGATAATCCTGATCTTTGCATGTCAGATTCATGTAAAAAGAAGAATAACCTTATTGCACCAATTGTTGCATCTCTTTCAGCTTTGCTTGTAACCCTCTTCATTGCTCTTGGATTTTGGATGATAAAAAGAAGGCAGAAAGCTTTTCCTTCTCGTTCCAAGATGAGGCAATCAATGAGATCAAAATATCATGTATTTAGTTACAGTGAGATTCTCGATATTACGGAAAATTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTATACTTCGGTATTCTATATGATAATACCCAGGTTGCTGTTAAGTTGCTTTCACCTTCGTCAGCACAAGTTACACTCATTGGGTATAGTGACGAAGTTAATAATCCAAACGTCTTGAAGTGGAATGAAAGACTTATTATAGCAGTTGGTGCAGCACAAGGACTAGACTATCTTCATAATGGTTGTAAGCCTCCTCTTATCCACAGAGATTTGAAGCCTTCCAACATATTACTAGATCAAAACTTGAATGCCAAGATATCTGATTTTGGATTATGTAGAGCTTTAGGCAGCGACACCGATACCCATATATCAACTCAACCTGCTGGTACACTAGGTTATTTTGATCCACAATTTCAGAGAACTGGAAACTTAAACAAAAAGAGTGATGTCTACAGCTTTGGAATAATTCTATTAGAGTTAATCACTGGCCAACATGCAATAGCAAGGACATCAGAAAAAAATATTCACATCCTTGAATGGGTTATTCCCACAGTTGAAAGAGGAGATATTTGTAACATTGTTGATCCAAGACTAAAGGAAGAATTCAATACCAATTCTGCATGGAAACTTGTAGACATCGCCATGTCTTGCATTTCACCAACAGCAGCTGAAAGGCCAGACATCAGCGAAATATTGCCAGAGCTAAAGGAATGCCTATCTTTAGAGATGAATCAGAGAGATGACAGAAGATCAAAAACTACATTTGAATTGAATTCATTACAAATCGACTCAGAAATTTTTCCCTTGGCTAGGTAGCCACTATACTTCGCACTATTCCATGTCACTGTTAATGTGTAGGTAGATATACTTTATAGTTTTAATGCTTTCTAGTTCTAAAGAATGGTGTATGCAACTACTACAGTGTTAGTAATGTTTAACTCAAAGCAAAATTTCTG 2721 0.3907 MKGETQWTVILNVWACVVLVSVFIIHTNSALEKHVAREMVTNNNTPPGFINIDCGSDIAYADPDTGFWYETDNGFVETGTNHMASPNANLGRYRDFGKQLTTLRCFPEGERNCYSLKPELGKNNSKYLIRAMFSYGNYDGKNQGPSFEVYIGVNLVDKIDLAGYGYHNLEVIHSPSGESKSIEVCLLKSGPTVPCISSLELRPLNSSIYSTPIVSTASTQPLLCLELRKDDVYDRMWRCDINGTKDWYPLEMDLANFNNGSSDYKLPSSVLKTAVESLNVSEPLQFDFNLLFYSLDNTFEYMVYFHFAEIKKLPNGQKRIINVTFNYDAILPSPLVLEYLKPVTISHLQRNPGVVLFNISATPKSYAPPILNAFEIHKLIPQLDSPTHAADVGAIVNIKSVYQISRLNWQGDPCVPKKHAWDGLVCRSYDTIPRIISLNLSSSKLTGEISISFTNLTELEILDLSLNQLEGPLPEFLAELPKLKILNVTGNKLSGSIPEVLKGKANLQLSAGDNPDLCMSDSCKKKNNLIAPIVASLSALLVTLFIALGFWMIKRRQKAFPSRSKMRQSMRSKYHVFSYSEILDITENFKTIIGEGGFGKVYFGILYDNTQVAVKLLSPSSAQVTLIGYSDEVNNPNVLKWNERLIIAVGAAQGLDYLHNGCKPPLIHRDLKPSNILLDQNLNAKISDFGLCRALGSDTDTHISTQPAGTLGYFDPQFQRTGNLNKKSDVYSFGIILLELITGQHAIARTSEKNIHILEWVIPTVERGDICNIVDPRLKEEFNTNSAWKLVDIAMSCISPTAAERPDISEILPELKECLSLEMNQRDDRRSKTTFELNSLQIDSEIFPLAR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00908 851 ProSitePatterns Protein kinases ATP-binding region signature. 593 615 IPR017441 GO:0005524
Pste6g00908 851 SMART serkin_6 587 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00908 851 ProSiteProfiles Protein kinase domain profile. 483 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00908 851 Gene3D Ribonuclease Inhibitor 395 519 IPR032675 -
Pste6g00908 851 Pfam Malectin-like domain 52 378 IPR024788 -
Pste6g00908 851 SUPERFAMILY L domain-like 418 508 - -
Pste6g00908 851 PANTHER OS07G0107800 PROTEIN-RELATED 50 823 - -
Pste6g00908 851 SUPERFAMILY Protein kinase-like (PK-like) 568 814 IPR011009 -
Pste6g00908 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Pste6g00908 851 Gene3D Transferase(Phosphotransferase) domain 1 634 832 - -
Pste6g00908 851 Pfam Leucine rich repeat 437 493 IPR001611 GO:0005515
Pste6g00908 851 FunFam Leucine-rich repeat receptor-like kinase 390 520 - -
Pste6g00908 851 Gene3D Phosphorylase Kinase; domain 1 551 633 - -
Pste6g00908 851 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 620 828 - -
Pste6g00908 851 Pfam Protein kinase domain 647 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00908 Pste-Chr6 3541570 3556084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00908 48 851 Receptor kinase-like Gene Family AT1G07560 39.310 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste6g00908 Malectin_like 6.3e-69 CL0202