Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00904 atggttgatgttgttaaggatattaacctgaaacatgcttgtgcacctatctctaaagaagtgattcaagaaacccttgacttttatgaagatgaagtggaagaaatatactcaaaggctgttgaaacactatctgctttcttaaagtggaaaaaggaatatggctctaaagtttctatgtgtctgaggtgcagtgcactatttaacagaaaagcagcaagaggctttgagaagtctgaatatcgagagaaaatgaccaaagctaagatgcaagagagaaacaaagtggtcatcgagatgtttgaaagtaagctagaaatggtcaaggctgaccaaactacttatgaagcctatgtgtcaatggttgaagagcctacaaaagcattggtagtaatagcttctttcctaattaagaatgtggatgattttaactacataactgctcccttgacttttaagtggaacctgcaagtggggttctatttcagtaatattgaatctgaagttgataatatcaaaatggccaccttggctgaggtaaatcaaaaggaaaactcaactcatgtaagggtcgaggatgacgaaaaagcattgatggttgttgcaaccatcgaagaaaaaaagtgtacaacggctccaaaagtcgtccaaaaagaagatttagactcagatgctaaggccaagaaaaaggagcaaaaccaagatttgaaggagcaaaaaatggccaatatgttagtagatttgacatctaagaatgaaatgttaagtttgcttgatggttatgctggttataatcagatttttattgttcgagaagatgtttctaaaatagcctttagggatgaagctcagcaagtgaaacaaatcgttaatgatgttttggctgaactagacaatacgttattgtctattactgaatttccagtgggattagaatctcatgtgaatgaagtgattcggtttattgaaactcaatcaagcaaagtttgtatgatagggatttgggggatgggaggatcaggtaaaacaaccactgccaaagccatctataatcgaattcgccgtaaattttctcatagaagtttcattgaaaacattagacaggtttgtgaacatgacagtgaagggcatattcatttacaagaacaacttctttcggatctcttgcaaacagttataaaggtacgtagtactgcaacagggataactttgattgaggaaaggcttcgtgcaaaaagaacacttattgtacttgatgatgtgaccaagtttgatcaattgactgtcctatgtggaaatcgtaaatggataaatttaggaagtgtattaattgttacatcaagagacatacggctacttaatttactaaaagttgattatatttataagatggaggaaatgaatgaaagtgactcacttgagcttttaagttggcatgcttttagagaagcaactcctatagaagacttcattgacctctcaagagatttggttgcttattgtggaggactcccactagctcttgaagttcttggatcttacttacatgggagaaccaaacaagagtggaaaagtgtgttgttaaagctaaaaagaattcccaatgatcaagttcacagcaaactaagaataagctttgatggtttacaagacgagatggaaaaggatatatttctggacatatgttgtttctttattggtaaagatagagcctatgttacagagatactaaactcttgtggactacatgctgatattggaataaaaattctcatagagcgtagcctcataaaaattgaagagcataataaacttggaatgcatgatttgttacgagatatgggaagagagattattcgtgaaagttcaccaaaggaacttggaaggcgcaatcgattatggtttcatcaggatgtagttgaggggacaaatgctattgagggattagcatttaaattacatggaagtggtagacattgctttaaagctaatgcttttaaggaaatgaagagattgaaactgctgcaacttgagtctgtacaactcactggatcttttgggtatctttctaagcaattaagatggatatgttggcgagaatttcctttgaaatacataccagataacttttatcaagaacatgtagttgcaattaacttaaaacacagtaatcttaaacttgtttggaagcaacctcagttgttggagttgctaaagattctcaatcttagtcattccaaacacttaacaacaactcctgacttttctaaactaccgaatctagaaaagcttattctcaaagattgtccaagtttgtgcaagattgacaagttagaagaagatatagtgcaaatggaatccttgacaactttaattgcagaagatattgcagtgaaacatgttcccttttctataagtatcaactatctgaagaattaa 2439 0.0 MVDVVKDINLKHACAPISKEVIQETLDFYEDEVEEIYSKAVETLSAFLKWKKEYGSKVSMCLRCSALFNRKAARGFEKSEYREKMTKAKMQERNKVVIEMFESKLEMVKADQTTYEAYVSMVEEPTKALVVIASFLIKNVDDFNYITAPLTFKWNLQVGFYFSNIESEVDNIKMATLAEVNQKENSTHVRVEDDEKALMVVATIEEKKCTTAPKVVQKEDLDSDAKAKKKEQNQDLKEQKMANMLVDLTSKNEMLSLLDGYAGYNQIFIVREDVSKIAFRDEAQQVKQIVNDVLAELDNTLLSITEFPVGLESHVNEVIRFIETQSSKVCMIGIWGMGGSGKTTTAKAIYNRIRRKFSHRSFIENIRQVCEHDSEGHIHLQEQLLSDLLQTVIKVRSTATGITLIEERLRAKRTLIVLDDVTKFDQLTVLCGNRKWINLGSVLIVTSRDIRLLNLLKVDYIYKMEEMNESDSLELLSWHAFREATPIEDFIDLSRDLVAYCGGLPLALEVLGSYLHGRTKQEWKSVLLKLKRIPNDQVHSKLRISFDGLQDEMEKDIFLDICCFFIGKDRAYVTEILNSCGLHADIGIKILIERSLIKIEEHNKLGMHDLLRDMGREIIRESSPKELGRRNRLWFHQDVVEGTNAIEGLAFKLHGSGRHCFKANAFKEMKRLKLLQLESVQLTGSFGYLSKQLRWICWREFPLKYIPDNFYQEHVVAINLKHSNLKLVWKQPQLLELLKILNLSHSKHLTTTPDFSKLPNLEKLILKDCPSLCKIDKLEEDIVQMESLTTLIAEDIAVKHVPFSISINYLKN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00904 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 561 IPR027417 -
Pste6g00904 812 PRINTS Disease resistance protein signature 408 422 - -
Pste6g00904 812 PRINTS Disease resistance protein signature 733 749 - -
Pste6g00904 812 PRINTS Disease resistance protein signature 331 346 - -
Pste6g00904 812 PRINTS Disease resistance protein signature 501 515 - -
Pste6g00904 812 SUPERFAMILY "Winged helix" DNA-binding domain 537 641 IPR036390 -
Pste6g00904 812 Gene3D - 291 461 IPR027417 -
Pste6g00904 812 Coils Coil 19 39 - -
Pste6g00904 812 Gene3D Ribonuclease Inhibitor 647 811 IPR032675 -
Pste6g00904 812 Gene3D - 466 550 IPR042197 -
Pste6g00904 812 Pfam NB-ARC domain 312 534 IPR002182 GO:0043531
Pste6g00904 812 SMART AAA_5 328 456 IPR003593 GO:0016887
Pste6g00904 812 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 252 802 IPR044974 GO:0006952
Pste6g00904 812 SUPERFAMILY L domain-like 651 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00904 Pste-Chr6 3521818 3533769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00904 309 772 WRKY Transcription Factor Family AT5G45050 32.929 9.72e-70 248