Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00886 ATGAGTTCTCAAAACCAAGAGGTATCATGGGTGATGGAGAATGGTGGGAACAACAACGTTGTGAATGCGTTGTTGAACAAGGAAATGAGACATGGAAGAACTGCACATATCCTTTCTTCTTCTTCTTTGCGCAAGAAATCTGATCTAACTATTGTGTCTAAGGTTAGTTCTGGCCTCATCAGAGGTGTGTTGGAGAATGTGCAAGAGGTTATTCTGGGAACCAAGCTCTCTATTTTGTTCATAACTATTCCCCTTGCAATAGTTGCTCAATGCTTTGGCTTTGGTAGACCATGGGTTTTTGCTTTGAGCTTGCTTGGGCTTACCCCACTTGCTGAACGAGTCAGCTTCTTGACAGAGCAGGTTGCTTATTACACTGGTCCCACAGTGGGAGAACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAACAATAACAAAATTGCTGTGGTCAAGTACTCTTTGCTTGGTTCCATCATTTCTAACCTTCTTCTTGTTCTTGGAACCTCTCTATTATGTGGTGGCATTACAAATCTTAGAAAGGAGCAAAAATACGATAGAAGACAGGCAGATATCAACTTGCTTATGCTGTTTGTGGCATTGCTTTGTCACTTGCTGCCATTGTTGTTCCAATATGTTGGTACCTCAGCAGGTGACATTGCAGACTCATCTCTGCGGTTGTCAAGAGTTGCTAGCATTATTATGCTGATTGCATATTGTGTATACCTTGTCTTCCAACTGTGGACTGACAGGCAGTTATTTGAAGCCCATGATGAAGACGATGAAGAGGGTGACAATGATTTAGAAGAAGTAGTGATAGGATTCTGGAGTGGAGTGGCTTGGCTGCTTGGGATGACTGTGATTATTGCTGTGCTGTCTGAGTATGTAGTGCAAACAATTGAGGATGCATCCGATTCATGGGGTTTGTCTGTTAGCTTTCTCAGCATAATCTTCCTTCCAATAGTTGGGAATGCAACTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATTTCCTTAGGTGTTTCCTTAGGTTCCTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTCTTGGAATCAGAATGGACCTCAACTTCAACCTCCTAGAGACAGGTTCTCTTGCTTTGGCAATAATAATCACAGCCTTCACCTTACAGGACGGGACTTCTCACTACATGAAAGGCCTTGTTCTCGTACTCTGCTACATTGTTATTGCTGCATGCTTTTTGGTACAAAGATTGCCTTCCAAGGCTCCATTTGTTGAAAATCCTGTTTAA 1332 0.4212 MSSQNQEVSWVMENGGNNNVVNALLNKEMRHGRTAHILSSSSLRKKSDLTIVSKVSSGLIRGVLENVQEVILGTKLSILFITIPLAIVAQCFGFGRPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGELLNATCGNATELIIAIFALNNNKIAVVKYSLLGSIISNLLLVLGTSLLCGGITNLRKEQKYDRRQADINLLMLFVALLCHLLPLLFQYVGTSAGDIADSSLRLSRVASIIMLIAYCVYLVFQLWTDRQLFEAHDEDDEEGDNDLEEVVIGFWSGVAWLLGMTVIIAVLSEYVVQTIEDASDSWGLSVSFLSIIFLPIVGNATEHAGAIIFAFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWILGIRMDLNFNLLETGSLALAIIITAFTLQDGTSHYMKGLVLVLCYIVIAACFLVQRLPSKAPFVENPV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00886 443 NCBIfam calcium/proton exchanger 79 427 IPR004798 GO:0006816|GO:0015369
Pste6g00886 443 FunFam Vacuolar cation/proton exchanger 272 429 - -
Pste6g00886 443 Gene3D - 272 429 IPR044880 -
Pste6g00886 443 Gene3D - 127 270 IPR044880 -
Pste6g00886 443 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 31 431 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste6g00886 443 FunFam Vacuolar cation/proton exchanger 127 271 - -
Pste6g00886 443 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016020|GO:0055085
Pste6g00886 443 Pfam Sodium/calcium exchanger protein 286 427 IPR004837 GO:0016020|GO:0055085
Pste6g00886 443 NCBIfam calcium/proton exchanger 63 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00886 Pste-Chr6 3457821 3465134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00886 10 433 Antiporters AT2G38170 67.290 0.0 565