Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00884 atggaaggtttgtacaacatcaattatctgtttgaagaagctgagaaaagatggctcaaacctgcagaagtgctttacattcttcggaatcacgaaaactgctatttcacccacaatccacctcataagccacctggtggatccgtctttctgtttaataaaagaatcaggcgtttctttcgcaaagatggtcataactggcggaagaaacgtgatggcagagttgtggcagaaccacatgaacggcttaagtctccaagccaagttaatcatccagcagtgatcaagttggatctctactgtaatctcccaaaccaggttggaaatgatgaaatcctaaactgttactatgcaattggtgacgagaaccctactcttcagagaaggagctattggatgttggagccggaatatgagcatatagttcttgtgcattatagagatacaagaaagatgcaatcaacttttgtggaaggaaggattgatggtgttctggtagtgaatgaggtggtggaggatgcaaggaggatgaaaggacaagatgtgtttgaaggtggatttgaaaaaaggcctataattctatcagctggagtatctgtgggatgttatgaaaaagatgaggtttggagtaaggtgattgagatgggttaa 651 0.0 MEGLYNINYLFEEAEKRWLKPAEVLYILRNHENCYFTHNPPHKPPGGSVFLFNKRIRRFFRKDGHNWRKKRDGRVVAEPHERLKSPSQVNHPAVIKLDLYCNLPNQVGNDEILNCYYAIGDENPTLQRRSYWMLEPEYEHIVLVHYRDTRKMQSTFVEGRIDGVLVVNEVVEDARRMKGQDVFEGGFEKRPIILSAGVSVGCYEKDEVWSKVIEMG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00884 216 SMART CG_1_2 10 150 IPR005559 GO:0003677
Pste6g00884 216 ProSiteProfiles CG-1 DNA-binding domain profile. 7 155 IPR005559 GO:0003677
Pste6g00884 216 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 154 - -
Pste6g00884 216 Pfam CG-1 domain 13 86 IPR005559 GO:0003677
Pste6g00884 216 Pfam CG-1 domain 106 148 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00884 Pste-Chr6 3443138 3448913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00884 5 153 CAMTA Transcription Factor Family AT1G67310 54.362 1.10e-53 182