Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00882 AACAAGTTTTGAGGTTTCAAAATTTTCATTTTTCGATGAGTTCTCAAAACCAAGAGGTATCATGGGTGATGGAGAATGGTGGGAACAACAACGTTGTGAATGCGTTGTTGAACAAGGAAATGAGACATGGAAGAACTGCACATATCCTTTCTTCTTCTTCTTTGCGCAAGAAATCTGATCTAACTATTGTGTCTAAGGTTAGTTCTGGCCTCATCAGAGGTGTGTTGGAGAATGTGCAAGAGGTTATTCTGGGAACCAAGCTCTCTATTTTGTTCATAACTATTCCCCTTGCAATAGTTGCTCAATGCTTTGGCTTTGGTAGACCATGGGTTTTTGCTTTGAGCTTGCTTGGGCTTACCCCACTTGCTGAACGAGTCAGCTTCTTGACAGAGCAGGTTGCTTATTACACTGGTCCCACAGTGGGAGAACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAACAATAACAAAATTGCTGTGGTCAAGTACTCTTTGCTTGGTTCCATCATTTCTAACCTTCTTCTTGTTCTTGGAACCTCTCTATTATGTGGTGGCATTACAAATCTTAGAAAGGAGCAAAATACGATAGAACAGGCAGATATCAACTTGCTTATGCTGTTTGTGGCATTGCTTTGTCACTTGCTGCCATTGTTGTTCCAATATGTTGGTACCTCAGCAGGTGACATTGCAGACTCATCTCTGCGGTTGTCAAGAGTTGCTAGCATTATTATGCTGATTGCATATTGTGTATACCTTGTCTTCCAACTGTGGACTGACAGGCAGTTATTTGAAGCCCATGATGAAGACGATGAAGAGGGTGACAATGATTTAGAAGAAGTAGTGATAGGATTCTGGAGTGGAGTGGCTTGGCTGCTTGGGATGACTGTGATTATTGCTGTGCTGTCTGAGTATGTAGTGCAAACAATTGAGGATGCATCCGATTCATGGGGTTTGTCTGTTAGCTTTCTCAGCATAATCTTCCTTCCAATAGTTGGGAATGCAACTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATTTCCTTAGGTGTTTCCTTAGGTTCCTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTCTTGGAATCAGAATGGACCTCAACTTCAACCTCCTAGAGACAGGTTCTCTTGCTTTGGCAATAATAATCACAGCCTTCACCTTACAGAATATAAATAAAACTATTACACAAAAT 1271 0.4107 MSSQNQEVSWVMENGGNNNVVNALLNKEMRHGRTAHILSSSSLRKKSDLTIVSKVSSGLIRGVLENVQEVILGTKLSILFITIPLAIVAQCFGFGRPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGELLNATCGNATELIIAIFALNNNKIAVVKYSLLGSIISNLLLVLGTSLLCGGITNLRKEQNTIEQADINLLMLFVALLCHLLPLLFQYVGTSAGDIADSSLRLSRVASIIMLIAYCVYLVFQLWTDRQLFEAHDEDDEEGDNDLEEVVIGFWSGVAWLLGMTVIIAVLSEYVVQTIEDASDSWGLSVSFLSIIFLPIVGNATEHAGAIIFAFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWILGIRMDLNFNLLETGSLALAIIITAFTLQNINKTITQN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00882 412 NCBIfam calcium/proton exchanger 63 404 - -
Pste6g00882 412 Gene3D - 127 269 IPR044880 -
Pste6g00882 412 Gene3D - 271 410 IPR044880 -
Pste6g00882 412 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 31 404 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste6g00882 412 Pfam Sodium/calcium exchanger protein 98 254 IPR004837 GO:0016020|GO:0055085
Pste6g00882 412 Pfam Sodium/calcium exchanger protein 285 402 IPR004837 GO:0016020|GO:0055085
Pste6g00882 412 NCBIfam calcium/proton exchanger 79 399 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00882 Pste-Chr6 3427743 3434957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00882 11 403 Antiporters AT3G51860 71.000 0.0 513