Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00881 GAAGGGAACCCAAGTGAGTGATTATCGAAAGGTTAGGAATTGGGAGTAGTGTGTAGAGTGGAAGATGGCAACCGCGCCGGTGTTGGAGGGAGGAGCGGCGCCGCAGCCTCCGGGGACTGACATGACCGGAATATGCTTCCGAGATCAGCTATGGCTTAACAGCTTCCCTCTGGATCGCAACTTGGTATTCGATTACTTCGCACTTTCTCCTTTCTACGATTGGAGCTGCAACAACGAGCAACTGCGTATGCGCTCCGTTCACCCGCTCGATATCTCTCAACTCTCCAAAATGACGGGAACCGAGTATATGCTCAGCGAAGTTATGGAGCCTCACCTGTTTGTGATTCGCAAGCAGAAGCGAGATAGCCCCGACAAAGTTACTCCTATGCTCGCTTATTATGTTCTCGATGGTTCTATTTACCAGGCTCCGCAACTTTCCAATGTTTTTGCCGCCAGAATTGGTAGGGCTCTTTATTACATACAAAAGGCATTTACTACAGCTGCCTCAAAGTTGGAGAAGATTGGATATGCTGGGTCAGCTGATTCTGAAAATGAGACTGCTTTGCTGGAATCAAAGACTAGTAAGGAGACAATCGACATAAAGGAAGTTAAGCGAGTGGATCATATTCTTGCATCCTTGCAACGCAAGTTGCCACCTGCACCTCCTCCACCACCATTTCCAGAAGGATATCTTCCTCCTCCAACAGCAGAAACTGAGAAAGGCACAGAAACTCAGGAAGCAGCAGAAACGCAAGCTCCTACTGCTGATCCCATAATTGATCAAGGACCAGCAAAAAGAATGAAATTTTGATATAGAAGGCATACCACAATGGCATTAATACTTACACTGGTGGAGGAGAATTATTCCTAACAGGCGGCCCCTGTTGAAACATGATTAACTTAATGTTATATCTGGTCTAAAATGCATTTCTCTTTTTGTGTCTTCATCATAAATGTAGATATCATCACTGAAATAGGATTGCATTCTCTTGTATTTTTCATTCTAGGCAATGTATTGAGCAATTGTAACTTGTAAGTGTTAACAAAACTAGTATCCCCCGCATCGGACATTTTCCAGAACACCTTAGGAAATTAGATTCCTATTTAGTGTGTAACAATATTTTGTCCACTAGGTTGAACTGTCTTAAATTCTGGATGTAGTGGAAACTTAGCGAGCTGCGGCATCATGACCTGTTTGACTTTCATAACCATGTTAAGCTTGTTTTGACTATAGTCCAAAACATTAAAGACGGAACGGAAGCAATAGGGTAGTAGTTATTGCAAATATATATGGAAGGAAAAGGAGTTGAATTTGG 1316 0.4316 MATAPVLEGGAAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWSCNNEQLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLSNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTSKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYLPPPTAETEKGTETQEAAETQAPTADPIIDQGPAKRMKF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00881 248 PIRSF MED6_meta/plant 9 248 IPR016820 GO:0003712|GO:0006357|GO:0016592
Pste6g00881 248 MobiDBLite consensus disorder prediction 195 211 - -
Pste6g00881 248 MobiDBLite consensus disorder prediction 192 248 - -
Pste6g00881 248 FunFam Mediator of RNA polymerase II transcription subunit 6 17 146 - -
Pste6g00881 248 Pfam MED6 mediator sub complex component 23 148 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pste6g00881 248 Gene3D Mediator complex, subunit Med6 17 146 IPR038566 -
Pste6g00881 248 PANTHER MED-6-RELATED 2 248 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Pste6g00881 Med6 4.4e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00881 6 3427440 3432367 Pste6g00881 6 3427440 3432367 ECH