Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00877 atgcacaagaggcgtgccactggtggcaagaagaaggcatggaggaagaagagaaagtatgagcttggtcgccagccggctaacactaagctatcaagcaacaagacagtcaggaggatccgtgttaggggtggcaatgtgaagtggagggcattgagattggatactggaaattattcctggggaagtgaagctgtaactcgcaagactcggctacttgatgtggtttacaatgcctcaaacaacgagcttgtgcgaacccagacacttgtcaaaagtgctattgttcaggttgatgctgctccattcaagcagtggtaccttcagcactatggtgttgaccttggtaggaagaagaagacagcagcttccaagaaggaaactgcagaggagggtgatgccgccgctgcagaagaaaccaaaaagagtaaccatgtgcagagaaaattggagaagcgccagaaagatcgtaagcttgatccacatattgaggagcagtttggtggtggacgtttgcttgcttgcatctcctctcgacctggtcaatgtggccgagctgacggatacattctggaaggtaaggagttggaattttacatgaagaaacttcagaggaagaaaggaaagggcgctgcttga 639 0.0 MHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDLGRKKKTAASKKETAEEGDAAAAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00877 212 Gene3D Ribosomal protein S8e, subdomain 102 170 IPR042563 -
Pste6g00877 212 MobiDBLite consensus disorder prediction 1 19 - -
Pste6g00877 212 ProSitePatterns Ribosomal protein S8e signature. 4 23 IPR018283 GO:0003735|GO:0005840|GO:0006412
Pste6g00877 212 PANTHER 40S RIBOSOMAL PROTEIN S8 1 209 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pste6g00877 212 MobiDBLite consensus disorder prediction 1 26 - -
Pste6g00877 212 FunFam 40S ribosomal protein S8 25 155 - -
Pste6g00877 212 NCBIfam ribosomal protein eS8 2 193 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pste6g00877 212 Pfam Ribosomal protein S8e 2 191 IPR022309 -
Pste6g00877 212 FunFam 40S ribosomal protein S8 156 209 - -
Pste6g00877 212 FunFam 40S ribosomal protein S8 102 170 - -
Pste6g00877 212 Gene3D - 17 207 - -
Pste6g00877 212 CDD Ribosomal_S8e_like 2 191 - -
Pste6g00877 212 MobiDBLite consensus disorder prediction 122 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00877 Pste-Chr6 3421718 3424398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00877 1 200 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.500 2.56e-122 343