Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00868 atgcttatgggattttgtctttacatgtatgctgtctgctgtgggcataaaccagcatcatgtgaagttcaggctcacaaaggtgatagagtcaaagtacactatcggggaaaactcactgatggaactgttttcgattctagctttgaaagaaacaatccaattgaatttgagcttggtagtggtcaagtgatcaaaggttgggatcagggattattgggaatgtgtcttggtgagaagcggaagctgaaaataccagcaaaacttggctatggagagcagggttccccgcccactattccaggtggtgcaacactcatatttgacactgagcttgtgggagtgaacgaccaaagtttgggagaagaaaaagataaaagctccgaactgtaa 393 0.0 MLMGFCLYMYAVCCGHKPASCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGSGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDQSLGEEKDKSSEL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00868 130 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 28 116 IPR001179 GO:0003755
Pste6g00868 130 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 22 113 IPR001179 GO:0003755
Pste6g00868 130 FunFam Peptidyl-prolyl cis-trans isomerase 12 117 - -
Pste6g00868 130 Gene3D - 14 129 IPR046357 GO:0003755
Pste6g00868 130 PANTHER PEPTIDYLPROLYL ISOMERASE 15 118 IPR044609 GO:0000413|GO:0003755|GO:0061077
Pste6g00868 130 SUPERFAMILY FKBP-like 17 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00868 Pste-Chr6 3381048 3386053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00868 24 118 Calmodulin-binding Proteins AT3G25230 29.000 1.11e-06 44.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02550 5 17949698 17956170 Pste6g00868 6 3381048 3386053 PCT