Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00866 atggacgaggatttcgacatcccggcggcggaccccatggccgacgatttcgacttcgccggtggcgacctcgacgccgccgccgccgcgccgcccctcaaagtcggcgaggagaaggagattggcagtcagggcttgaagaagaagcttctcaaggaaggtgatggttgggacactcctgaagttggtgatgaagttcaagttcactatactgggacattgcttgatggcactaagtttgattccagccgtgataggggaactcctttcagtttcacgcttggacaagggcaagttattaaaggatgggatgaaggtattaaaacaatgaagaaaggtgaaaatgctcttttcaccatcccacctgagctagcttatggtgaatctggttctcctccaactattccccccaatgcaactcttcaatttgatgtggagctgttgtcttggactagtgtgaaagacatatgcaaggatggaggtttatttaagaagatacttactgagggagagaaatgggagaaccccaaggatcctgatgaagttttagtaaagtatgaagcatgtcttgaagatggaactcctgtggcaaaatctgatggagtagagtttactgtcaaagatggtcatttttgtcctgctttctcaaaggctgttaaaaccatgaagaagggagagaaagtgcttctgacagtgaagccacaatatgcatttggtgagacgggtaagccagcacatggtggtgaaggtgcagttccaccaaatgcaacattgcagattactcttgaattagtttcttggaagactgtgtctgaaataactgatgacaagaaggtcatcaaaaagatcctcaaggaaggggaaggatatgagcgtccaaatgaaggagccattgtgaaattgaaggtaattggtaagctgcaagatggtactttgtttttgaaaaagggtcatgatgatgaaggggagctgttcgaattcaaaattgatgaggagcaagttattgatgggcttgacagagctgttttgactatgaagaagggtgaggtagcattgctgataattgcgcctgaatatgcatttggttcatcagaatctcagcaggaacttgcagttgttcctccaaactccactttgtattatgaggttgagcttgtgtcgtatgagaaggagaaggagtcctgggacatgaacacaccagagaagattgaagctgctggtaagaagaaagaagaaggaaatgcattatttaaagctggtaaatatacaagagcttccaaaagatatgaaaaggctgtaaagttgatcgagtatgatactgctttcaacgaagaggagaagaagagctccaaggcattgaaagttgcctgtaatcttaacaatgcagcatgcaagttaaagctaaaagattacaaacaagcagaaaaattgtgcacaaaggtactggagcttgaaagtactaatgtgaaagctctctatagaagggcgcaagcttatatccaattggctgatttagatttagctgaatttgatattaagaaagctcttgagattgaccctaacaacagggatgtcaagcttgagtacaagactttgaaggaaaagatgaaggagtacaacaaaaaagaggcaaaattttatggaaatatgttcaacaaactgcataagctggatcatcttgacagtaataaaccagtttccaaggatgcccaacccatgaatatcgacagcaaggcataa 1740 0.0 MDEDFDIPAADPMADDFDFAGGDLDAAAAAPPLKVGEEKEIGSQGLKKKLLKEGDGWDTPEVGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILTEGEKWENPKDPDEVLVKYEACLEDGTPVAKSDGVEFTVKDGHFCPAFSKAVKTMKKGEKVLLTVKPQYAFGETGKPAHGGEGAVPPNATLQITLELVSWKTVSEITDDKKVIKKILKEGEGYERPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGELFEFKIDEEQVIDGLDRAVLTMKKGEVALLIIAPEYAFGSSESQQELAVVPPNSTLYYEVELVSYEKEKESWDMNTPEKIEAAGKKKEEGNALFKAGKYTRASKRYEKAVKLIEYDTAFNEEEKKSSKALKVACNLNNAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPNNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFNKLHKLDHLDSNKPVSKDAQPMNIDSKA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00866 579 FunFam Peptidylprolyl isomerase 394 549 - -
Pste6g00866 579 PANTHER PEPTIDYLPROLYL ISOMERASE 38 153 - -
Pste6g00866 579 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 179 268 IPR001179 GO:0003755
Pste6g00866 579 SUPERFAMILY FKBP-like 155 272 - -
Pste6g00866 579 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 63 151 IPR001179 GO:0003755
Pste6g00866 579 SUPERFAMILY FKBP-like 271 406 - -
Pste6g00866 579 Coils Coil 522 542 - -
Pste6g00866 579 FunFam Peptidylprolyl isomerase 36 154 - -
Pste6g00866 579 SUPERFAMILY FKBP-like 41 155 - -
Pste6g00866 579 Gene3D Tetratricopeptide repeat domain 392 549 IPR011990 GO:0005515
Pste6g00866 579 FunFam Peptidylprolyl isomerase 155 268 - -
Pste6g00866 579 Gene3D - 269 390 IPR046357 GO:0003755
Pste6g00866 579 SMART tpr_5 406 439 IPR019734 GO:0005515
Pste6g00866 579 SMART tpr_5 489 522 IPR019734 GO:0005515
Pste6g00866 579 SMART tpr_5 455 488 IPR019734 GO:0005515
Pste6g00866 579 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 296 389 IPR001179 GO:0003755
Pste6g00866 579 Gene3D - 36 154 IPR046357 GO:0003755
Pste6g00866 579 FunFam Peptidylprolyl isomerase 269 391 - -
Pste6g00866 579 Pfam Tetratricopeptide repeat 489 522 IPR001440 GO:0005515
Pste6g00866 579 ProSiteProfiles TPR repeat profile. 489 522 IPR019734 GO:0005515
Pste6g00866 579 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 265 IPR001179 GO:0003755
Pste6g00866 579 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 59 148 IPR001179 GO:0003755
Pste6g00866 579 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 386 IPR001179 GO:0003755
Pste6g00866 579 Gene3D - 155 268 IPR046357 GO:0003755
Pste6g00866 579 SUPERFAMILY TPR-like 395 554 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00866 Pste-Chr6 3369399 3375523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00866 30 563 Calmodulin-binding Proteins AT3G25230 82.584 0.0 890