Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00847 ATGGATACAACAAAAACACTAATTGCTTTGGGGACTATACTGCTTCTGTTGCTCCCTTACCTTTCCATAGCTGATAACATTTATAGTCCTCACGATCGCTTCATCATCAACTGTGGATCATCCACCAACTTCTCAACGCCTTATGGTGAAAATTGGATTGCAGACAACAATTTCCTGCGGAAAATCAACGACTCGGTCGCTGCTACTGCCCAAACGCCATCAACTATACAGGGACCATACACCACAGCTCGTCTCTCTCATTCTCAATTCACTTACTCATTCCCTGTCACCGCAGGCCCCAAGTTCATTCGCCTCTTCTTCTTCTCATCTTCATACCAAAACAATTTTGATCGCTCCAAAGCCTATTTCTCAGTCATAGCAGGCCCATACACGCTCCTTCAACATTTCAACGCTTCCCTCAATGCTGATTTTGATGACGACCCTAGTAACCCAGATATCCTCTTCAGGGAGTATTGCATCAACCTCAAAGAAGATCAGAACCTCACCATAGCCTTCATTCCAAGCAATATTAAACAATCTTACGCTTTCATCAATGGAATACAGATTGTTTCCATGCCCTCTTATCTCTACTACACCAAACCTGAAAACTACTATGAAATTCCGCAGCTAATTTTTGCCAACAGCCCGACTCCATATCGTATCGAAAACAAATCAGCTCTCGAGACAATGTACCGATTAAACGCTGGAGGAGACAAAATCTACCCCTCAGAGGACACAGGTATGCTCAGAACTTGGGATTTTGATAACAACTACGTTGTTTCTCGAAGTGAAGCATATAATGTTGAGTTTGGAAATCTTAGTAAGCTGAACTTCAATAAGATTTCTAACTACACGGCACCAGACAAGGTGTATCGAACCCAAAGGAATATGGGAGCGAATGCTTCAATGAACATGAAGTTCAACCTCACTTGGCAGTTTTCTGTTGATTCTGGCTTCTACTACTTGCTAAGGTTATACTTTTGTGAACTTAGCCCTAAAGTTGAAGCCGTTGATTACATGAGATTCTTCATTTTCATAGCAGATGAGTTGGCTACGAATCGTGCAGATATTCTCTATTGGGTTAGAGAAAGGGCTGAACCAGTGGTTAAAGAATTCGTAGTTTCGATCCCAGAAACAGGGAAAAAAGCCAACCTTTCACTGAAAATGGGTCCTCACCGTAGCAGCTTCATCCAGGACGCAAAAATAAACGGAATTGAAATCTTCAAAATCAGCAACAGTGGAGACAGTCTCGCGGGACAAAACCCAGACCCACCTGTGAAAGCCCGCGAGGGTCCATTTCAAAGCCCAAACGATATTCAAAGCCCTAAGAAGAAACCCATTGGGGCCATCGCAGGTGCAGTTTGCAGCGTTGCTTTGCTCTCTTTTATTCTCGCCGCTTTGTTCCTTATCAAAGGCAAGGGTTTGGGTTGGAACCAAAAAGATGGAACTTCTCATGGGGGTGGCTCGTCGCTACCAACCAGCCTCTGCCGTCACTTCACGGTGGCGGAAATCAAAGCCGCCACGAACAACTTCGACGAACTCTTCATAGTTGGCGTGGGTGGGTTCGGCGATGTTTACAAAGGCTATATCGACGGTGGTTCAACGCGCGTGGCGATCAAGAGGCTGAAAAAGGGTTCACAGCAAGGTTTGAACGAGTTCCTGAACGAGATCGAAATGCTTTCACAGCTTCGTCATATGCATCTGGTTTCCCTCATTGGTTACTGCTACGAGAGCAACGAGATGATACTTGTTTACGATTTCATGGATCGTGGGACCCTCCGTGAGCATCTCTACGACACCGATAACCCTTCGCTCTCGTGGAATCAACGACTTCAGATCTGCATAGGTGCTGCACGGGGACTACATTATCTCCATGCAGGTGCCAAGCACATGATCATTCACCGTGATGTCAAGAGCACCAATATCTTATTGGATGAAAAATTGGTGGCTAAGGTTTCAGATTTCGGGTTATGTCGACTTGGGCCAACAGACCCGGAGTATTACAAACGACAACGTTTGACTGAAAAATCCGATGTTTACTCCTTTGGAGTGGTGCTTTTAGAGGTATTGTCTGGGAGGCAGCCTTTGCTCCGTACGGTGGAGAAGCAACAGGTGTCACTTGTTGATTGGACGAAGAATCTTCATAAGAAGGGTTCTTTGGTTGAAATTGTGGATCCTACACTGAAGGAGAAAATAGCACCCCAATGTTTGAACAAATTCGGTGATGTTGCGTTGAGCTGCTTGCTTGAGGATGGGACTCAGCGCCCTTCCATGAACGACGTCGTTGCCATGCTGGAGTTTGTTCTACTACTTCATGATAGTGCTGTTAAGGGTGTGATCGTGAGTGGTGATGGAGATCATGAGGATAGTAGTGAGGACATGTTTAGCAGTAGTTATGGTAGTGTACAACCTTCGGATTATAGTGATAGCAGTGGATTGAACACTAATATAATTGATTATAACTATGGGAGGAAGGGATCCGAAACGTTATTGATCCCTGAGAATGTTTTCTCTGAGATTAAGGATCCAAAGGGACGATGA 2541 0.4482 MDTTKTLIALGTILLLLLPYLSIADNIYSPHDRFIINCGSSTNFSTPYGENWIADNNFLRKINDSVAATAQTPSTIQGPYTTARLSHSQFTYSFPVTAGPKFIRLFFFSSSYQNNFDRSKAYFSVIAGPYTLLQHFNASLNADFDDDPSNPDILFREYCINLKEDQNLTIAFIPSNIKQSYAFINGIQIVSMPSYLYYTKPENYYEIPQLIFANSPTPYRIENKSALETMYRLNAGGDKIYPSEDTGMLRTWDFDNNYVVSRSEAYNVEFGNLSKLNFNKISNYTAPDKVYRTQRNMGANASMNMKFNLTWQFSVDSGFYYLLRLYFCELSPKVEAVDYMRFFIFIADELATNRADILYWVRERAEPVVKEFVVSIPETGKKANLSLKMGPHRSSFIQDAKINGIEIFKISNSGDSLAGQNPDPPVKAREGPFQSPNDIQSPKKKPIGAIAGAVCSVALLSFILAALFLIKGKGLGWNQKDGTSHGGGSSLPTSLCRHFTVAEIKAATNNFDELFIVGVGGFGDVYKGYIDGGSTRVAIKRLKKGSQQGLNEFLNEIEMLSQLRHMHLVSLIGYCYESNEMILVYDFMDRGTLREHLYDTDNPSLSWNQRLQICIGAARGLHYLHAGAKHMIIHRDVKSTNILLDEKLVAKVSDFGLCRLGPTDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRTVEKQQVSLVDWTKNLHKKGSLVEIVDPTLKEKIAPQCLNKFGDVALSCLLEDGTQRPSMNDVVAMLEFVLLLHDSAVKGVIVSGDGDHEDSSEDMFSSSYGSVQPSDYSDSSGLNTNIIDYNYGRKGSETLLIPENVFSEIKDPKGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00847 846 MobiDBLite consensus disorder prediction 415 441 - -
Pste6g00847 846 FunFam Receptor-like protein kinase FERONIA 483 587 - -
Pste6g00847 846 FunFam FERONIA receptor-like kinase 33 193 - -
Pste6g00847 846 PANTHER OS03G0124300 PROTEIN-RELATED 12 468 IPR046957 GO:0004672
Pste6g00847 846 Pfam Malectin-like domain 36 410 IPR024788 -
Pste6g00847 846 FunFam FERONIA receptor-like kinase 225 411 - -
Pste6g00847 846 Gene3D Phosphorylase Kinase; domain 1 496 587 - -
Pste6g00847 846 MobiDBLite consensus disorder prediction 794 809 - -
Pste6g00847 846 Gene3D - 225 412 - -
Pste6g00847 846 Gene3D - 33 193 - -
Pste6g00847 846 MobiDBLite consensus disorder prediction 787 809 - -
Pste6g00847 846 ProSitePatterns Protein kinases ATP-binding region signature. 517 540 IPR017441 GO:0005524
Pste6g00847 846 ProSiteProfiles Protein kinase domain profile. 511 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00847 846 SMART serkin_6 511 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00847 846 Pfam Protein tyrosine and serine/threonine kinase 517 765 IPR001245 GO:0004672|GO:0006468
Pste6g00847 846 Gene3D Transferase(Phosphotransferase) domain 1 588 776 - -
Pste6g00847 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pste6g00847 846 SUPERFAMILY Protein kinase-like (PK-like) 488 768 IPR011009 -
Pste6g00847 846 FunFam Os07g0541700 protein 588 674 - -
Pste6g00847 846 CDD STKc_IRAK 517 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00847 Pste-Chr6 3290477 3293691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00847 21 846 Receptor kinase-like Gene Family AT3G51550 43.405 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste6g00847 Malectin_like 1.7e-35 CL0202