Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00842 GTGTAGAAAGAAAAAGAAACATAAAAATGAGTTCTGGAAACCACGATTCACAGGTTGTGATGGAGAATGGTGGGAACAACAACGTTGTGAAGGGGTTGTTGAGCAAGGAAATGAGACATGGAAGAACTGCACATAACATGTCTTCTTCTTCTTTGCGCAAAAAATCTGATCTCACCCTTTTGTCTAAGGTTCGTTCTGGTTCAATCAGAAAAGTGTTAACCAATGTACAAGAGGTTATTCTGGGAACCAGGCTCTCTATTTTGTTCCCTGCTATTCCCCTTGCAATTGTTGCTCGATGCTATGGTTTTGGAAGATCTTGGGTTTTTGCTTTGAGTTTATTGGGACTTACCCTACTTGCAGAACGAGTCAGCTTCTTGACAGAACAGATTGCCTATTACACTGGTCCTACAGTGGGAGGACTATTGAATGCAACGTGTGGGAATGCTACAGAGCTCATCATTGCAATTTTTGCCCTTAGCCATAACAAAATTGCTTTGGTCAAATATTCTCTCTTGGGTTCCATAATGTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCTGTGGTGGCATTGCAAACCTTAGACAAGAGCAAAAATATGATAGAAGACAGGCTGATATGAACTTGTTGATGTTGTTTGTGGCATTGCTGTGCCACTTGCTTCCATTGCTGTTCCAGTATGTTGGTGATTCAGAAGGTGACAGTGCAGATTCATCTTTGCAGTTGTCAAGAGTTGCTAGCATTGTTATGGTGATTGCATATAGTGCTTACCTTGTGTTCCAACTGTGGACTCACAGGCAGCTATTTGAAGCCCAAGATAAAGATGATGAAGATGCTGACAATGATTCAGAAGAACCAGTGATAGGATTCTGGAGTGGGTTTGCTTGGCTTGTTGGGATGACGTTGACCATTGCTTTGCTGTCTGAATATGTGGTGCAAACAATTGAGGATGCATCTGATACATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGCAACGCAACTGAACATGCAGCAGCAATCATATTTGGTTTCAAGAACAAATTGGACATCTCATTGGGTGTTTCCTTGGGTTCTTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTATGGGCATCAAAATGGACCTTAACTTCAACCTTCTGGAAACGAGTTCTCTTGCCTTGGCAATAATAATCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTGGTTCTCATTATCTGCTACATAATTATTGGGGCATGCTTTTTTGTACAAAGAACACCCTCT 1328 0.4157 MSSGNHDSQVVMENGGNNNVVKGLLSKEMRHGRTAHNMSSSSLRKKSDLTLLSKVRSGSIRKVLTNVQEVILGTRLSILFPAIPLAIVARCYGFGRSWVFALSLLGLTLLAERVSFLTEQIAYYTGPTVGGLLNATCGNATELIIAIFALSHNKIALVKYSLLGSIMSNLLLVLGTSLFCGGIANLRQEQKYDRRQADMNLLMLFVALLCHLLPLLFQYVGDSEGDSADSSLQLSRVASIVMVIAYSAYLVFQLWTHRQLFEAQDKDDEDADNDSEEPVIGFWSGFAWLVGMTLTIALLSEYVVQTIEDASDTWGLSVSFLSIILLPIVGNATEHAAAIIFGFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWIMGIKMDLNFNLLETSSLALAIIITAFTLQDGTSHYMKGLVLIICYIIIGACFFVQRTPS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00842 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 30 432 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste6g00842 434 NCBIfam calcium/proton exchanger 81 428 IPR004798 GO:0006816|GO:0015369
Pste6g00842 434 NCBIfam calcium/proton exchanger 62 428 - -
Pste6g00842 434 FunFam Vacuolar cation/proton exchanger 273 429 - -
Pste6g00842 434 FunFam Vacuolar cation/proton exchanger 127 271 - -
Pste6g00842 434 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016020|GO:0055085
Pste6g00842 434 Pfam Sodium/calcium exchanger protein 285 423 IPR004837 GO:0016020|GO:0055085
Pste6g00842 434 Gene3D - 274 428 IPR044880 -
Pste6g00842 434 Gene3D - 127 265 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00842 Pste-Chr6 3250260 3256056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00842 11 433 Antiporters AT2G38170 69.789 0.0 584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02104 5 13645785 13649722 Pste6g00842 6 3250260 3256056 PCT