Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00840 atggcagccaaagcaatgatttctctattcattttgttattctcattctcgatatccaacgctgaaatatcagcgaaagtgggagtgaactatgggcaattggggaataaccttccaacgccgacaacttcagtgagtctcatacggtccttgctgaaagcgaagcgcgtgaaaatctacgacgcaaacgcggaaatcctaaacgcgcttaagaacacgggaattcaagtttcggttatgctaccgaaccagcttgtcgtgaacgcctcaacgaaccaaacattcgcggaccaatgggttcggtccaacgttgaaccgttctaccctgaaacgctgattcggtacctcctcgtcggcaacgaactcattagctccacaggcaacgaaacatggccccacatagtccctgcaatgcacagaattgcaaattccctcaaaacccttcgtttgcacaaagtgaaggttggaacgcctcacgccatggacgttctagcgtcgtcgtttccaccctcaaacggcactttcagaaacgacattgcgtttagcgtcatgaaaccgatgctaaagttccttcaaaaaacgcgctcctttttcttcctcgacgtgtaccccttcttcgcctgggcttccgaccaggcccacattgacttgggctactctctcttcgagcctacaaacataacggtaacggattcgttaacggggttgaaatacaccaacttatttgatcagatggttgacgccgtttatttcgcgatggaacggatcgggtacgcgggtattcggatcttcatagccgaaacgggttggcccaatgggggagacttggaccaagttggtgccaatgttcataacgctgccacgtataatagaaacattgttaagagactaactaaaaaaccggttttgggaaccccggctcgaccgggtttggttcttccaactattatattttctctttataatgagaaccttaaaccggggttcggtaccgagcggcattttgggttgttgtacccgaacgggtcgagggtttacgacatcgatctctcgggcgagacgccggagtcggaccttgaaccgattccggcggctgtggactataagggggaggcgtggtgcgttgtggcggagggagcgaatgtgacggcggtggcggcggcgttatcgtatgcatgctcgcaggggaatgggacttgtgacccggttcaaccggggaaagcgtgttttgaaccggattcggttgtggcgcatgctaactatgcatttagtgcttattgggcgcagtttaggagtgtgggtggaacttgctttttcaatgggcttgcaacccaaacatcaaaggatccaagttatggatcttgcaagttcccaagtgtgactctttga 1389 0.0 MAAKAMISLFILLFSFSISNAEISAKVGVNYGQLGNNLPTPTTSVSLIRSLLKAKRVKIYDANAEILNALKNTGIQVSVMLPNQLVVNASTNQTFADQWVRSNVEPFYPETLIRYLLVGNELISSTGNETWPHIVPAMHRIANSLKTLRLHKVKVGTPHAMDVLASSFPPSNGTFRNDIAFSVMKPMLKFLQKTRSFFFLDVYPFFAWASDQAHIDLGYSLFEPTNITVTDSLTGLKYTNLFDQMVDAVYFAMERIGYAGIRIFIAETGWPNGGDLDQVGANVHNAATYNRNIVKRLTKKPVLGTPARPGLVLPTIIFSLYNENLKPGFGTERHFGLLYPNGSRVYDIDLSGETPESDLEPIPAAVDYKGEAWCVVAEGANVTAVAAALSYACSQGNGTCDPVQPGKACFEPDSVVAHANYAFSAYWAQFRSVGGTCFFNGLATQTSKDPSYGSCKFPSVTL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00840 462 FunFam Glucan endo-1,3-beta-glucosidase 14 25 355 - -
Pste6g00840 462 Gene3D Glycosidases 25 356 - -
Pste6g00840 462 Gene3D - 368 460 - -
Pste6g00840 462 SUPERFAMILY (Trans)glycosidases 27 349 IPR017853 -
Pste6g00840 462 FunFam Glucan endo-1,3-beta-glucosidase 4 367 461 - -
Pste6g00840 462 SMART X8_cls 372 457 IPR012946 -
Pste6g00840 462 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Pste6g00840 462 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 446 IPR044965 GO:0004553|GO:0005975
Pste6g00840 462 Pfam X8 domain 373 444 IPR012946 -
Pste6g00840 462 Pfam Glycosyl hydrolases family 17 27 349 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00840 Pste-Chr6 3243596 3249191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00840 1 462 Glycoside Hydrolase AT4G14080 49.167 5.61e-175 498