Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00837 AGATTTTTCACCCGTCCCCTGTATATTGAAACATTTGGTTTCACTTGGTTGCTACACTTGTTCACTCACCCGCAAACCTCTCTCATCTTTAACACAAGAAGCAAAGTTTGGCACCGTTTCTCATTCTAGATCGTGATCGAAAGTTGTGAAGTTATTATGGGGAAAGCAAGCAGGTGGTTTAAGGGGTTGTTGGGGATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCCAGGAAAGGATGGAGCACCTTCAGTTCCTGATCCTGCCACAGATAACACTTGGCTCAGATCCTATATTTCTGAGACAGAAAATGAGCAGAACAAACATGCAATTGCCGTGGCTGCTGCCACTGCCGCTGCCGCTGATGCCGCTGTGGCCGCTGCACAGGCGGCCGTGGCGGTTGTGAGGCTGACAAGCCAGGGTAGAGGAACATTGTTCAGTGGAAGCAGGGAGAAGTGGGCAGCCGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCGCGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAGGCTCTTGTTAGAGGGTATTTGGTCAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACAGCTGTTAGAACACAGCGAGCTCGTCGTTCAATGAGCAAAGAAAACAGATTTCTGCCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGAAGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAATCATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCAAGGTCGAGGCGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGTCATGCAATCTCATCCCCTCTTCCTTGTCCAGTCCCTGGTCGAATCTCAGTTCCTGATTGCAGACATGTTCAAGATTTTGATTGGTACTTCAATGTTGATGAATGTAGATTCTCCACAGCTCATAGCACCCCACGTTTCACAAACTATGTGCGGCCTAATGCTCCAGCTACACCTGCCAAGAGTGTTTGTGGAGACACCTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGGCCAACACTCAGTCATTCAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATCAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAACAGGAATCCTGGAATTTTTGACAGTTGGAGAATCAAAAGGAAAAATTGGAGTCTAAATGATGTTAGTAATATCTAGAATTTGTTTTTTTCACTTGAGCTTACATCTTATAGATTCAGGGATGAAATTCTAAATTCTGCTTGTGTACATTCTTTTAATTAAAGAGTTTTCTTTTTTCTCAATCATGTCCCTTCTCTTGT 1533 0.4436 MGKASRWFKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDGAPSVPDPATDNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKENRFLPEVLARKSVERFEETRSEFHSKRLPTSYESSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRHVQDFDWYFNVDECRFSTAHSTPRFTNYVRPNAPATPAKSVCGDTFFRPCSNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEQESWNF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00837 399 Gene3D - 59 142 - -
Pste6g00837 399 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
Pste6g00837 399 SMART iq_5 115 137 IPR000048 GO:0005515
Pste6g00837 399 SMART iq_5 138 159 IPR000048 GO:0005515
Pste6g00837 399 Pfam Protein of unknown function (DUF4005) 309 377 IPR025064 -
Pste6g00837 399 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Pste6g00837 399 MobiDBLite consensus disorder prediction 1 55 - -
Pste6g00837 399 PANTHER IQ-DOMAIN 5-RELATED 1 367 - -
Pste6g00837 399 Pfam IQ calmodulin-binding motif 143 157 IPR000048 GO:0005515
Pste6g00837 399 Pfam IQ calmodulin-binding motif 118 137 IPR000048 GO:0005515
Pste6g00837 399 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00837 Pste-Chr6 3226118 3228241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00837 1 381 IQD Protein Family AT3G16490 55.668 8.41e-114 336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00837 6 3226118 3228241 Pste6g00837 6 3226118 3228241 ECH
Pste3g03599 3 28257603 28259157 Pste6g00837 6 3226118 3228241 PCT