Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00831 ATGTTGAATGCAGCCAAGTGTTTTCCGGATAAAACAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGCACTTGTTAAAGGACCTTGGACTAAGGAGGAGGATGATAAAATGATGGAAATGGTGTCTATACATGGACCTGCAAAATGGTCTTTGATAGCCAAGTCTTTGCCTGGCCGAATTGGAAAACAGTGCCGAGAACGATGGTGCCATCATCTTAATCCTGATATAAAGAAGGGTACATGGACTTTGGAGGAGGAATTGGCTCTTATGGATGCTCATCGTATATATGGAAACAAATGGGCTGAAATAGCTAAGATTAAGATTCTTCATGGAAGGACTGATAATGCAATAAAAAACCATTGGAACAGTTCTTTGAAGAAAAAGATGGATTTTTATGTAGCTACTGGAAGACTTCCTCCCATTCCAAAAAGCAGTGCACAAGTTGATGCCACCACTGCATCATCATCTAAAACTACAGATGTTACAAAGCCAGATTGCAGTGATAAAAATCAACTAGAGTCATGTGGAACAGTTAGAGACTTTGTAGAGTCTTCAAATGTTACTGCAAAAGAATCAGCTAATTCACTTTCTTTAGATTCTTTTTATGTCAATACATCTAACATGCAGAATGAGGTTTTTTCTTCTCCAATGAAGTCAGCAGCTGGTTTCTTAACTCCACTTCCTGAGAAGAAGGGAAGTGTATTATGTAGAGAAGAATCTCCTGAATCAATATTGAAAAAGGCAGCTAGAACTTTCCCAACTCCTTCAATATTGAGGAAGAGAAGGTATGGAGCCAAAAGACCCAGCACTCCTGCAGAAGAACTTAATGGTTCACAACCCTGTGATGAACAACAGCAAACAAATGATGTTTCTAGTTCTGCAGCTGTGAGGTTACATTTGAGTCCAGCAAGCCATAGCCATGAGAATAACATTTCCCATAATAATGCTCTCAAAGAAACTCCAAACAGATTAAGATTAAGGCAAGCATTTATCAAGTCTTTGGAGAAACAGCTTGAATCTGCATATGACATCGAGAAGCGTGCCCGCATGATGGAAAAATCTACAGAGTGA 1083 0.3915 MLNAAKCFPDKTEVQCLHRWQKVLNPALVKGPWTKEEDDKMMEMVSIHGPAKWSLIAKSLPGRIGKQCRERWCHHLNPDIKKGTWTLEEELALMDAHRIYGNKWAEIAKIKILHGRTDNAIKNHWNSSLKKKMDFYVATGRLPPIPKSSAQVDATTASSSKTTDVTKPDCSDKNQLESCGTVRDFVESSNVTAKESANSLSLDSFYVNTSNMQNEVFSSPMKSAAGFLTPLPEKKGSVLCREESPESILKKAARTFPTPSILRKRRYGAKRPSTPAEELNGSQPCDEQQQTNDVSSSAAVRLHLSPASHSHENNISHNNALKETPNRLRLRQAFIKSLEKQLESAYDIEKRARMMEKSTE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00831 360 FunFam Transcriptional activator Myb isoform A 29 81 - -
Pste6g00831 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 80 IPR017930 -
Pste6g00831 360 PANTHER MYB PROTEIN-RELATED 5 63 - -
Pste6g00831 360 ProSiteProfiles Myb-like domain profile. 25 76 IPR001005 -
Pste6g00831 360 ProSiteProfiles Myb-like domain profile. 77 129 IPR001005 -
Pste6g00831 360 MobiDBLite consensus disorder prediction 149 165 - -
Pste6g00831 360 MobiDBLite consensus disorder prediction 276 297 - -
Pste6g00831 360 CDD SANT 32 76 IPR001005 -
Pste6g00831 360 Gene3D - 83 168 - -
Pste6g00831 360 SMART sant 81 131 IPR001005 -
Pste6g00831 360 SMART sant 29 78 IPR001005 -
Pste6g00831 360 MobiDBLite consensus disorder prediction 265 297 - -
Pste6g00831 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 133 IPR017930 -
Pste6g00831 360 CDD SANT 84 129 IPR001005 -
Pste6g00831 360 Gene3D - 27 82 - -
Pste6g00831 360 MobiDBLite consensus disorder prediction 147 173 - -
Pste6g00831 360 Pfam Myb-like DNA-binding domain 33 91 - -
Pste6g00831 360 SUPERFAMILY Homeodomain-like 28 125 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00831 Pste-Chr6 3210046 3213952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00831 3 360 MYB Transcription Factor Family AT3G09370 45.215 1.18e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g00831 Myb_DNA-bind_6 3.2e-15 CL0123