Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00826 atgaggcaagtgctacagggacttagtcacatgcacaaaagaggattctttcatcgggatttaaaacctgagaatttgctggtaacaaatgatgttttgaaaatagctgattttggactggctagagaagtatcttcaatgcctccatatactcaatatgtttccacacggtggtatcgagctccagaagttttgttgcgagctccttattatactcctgctgttgacatgtgggctgttggtgctatattagctgagctttttactttgacccccttatttcctggtgaaagtgaaatagatcagctgtaccaaatatatggcattcttggcatgccagattccaccgctttcaccgtaggggcgaataactctcagttattggacctagttgctcatgaagttgttccacctgtgaagctttctaatattattccaaatgctagtttggaagctatagacttgatcactcaactgttacattgggacccatcaagaaggccagatgcagatcagtcattgcaacatccatttttccatgtggatgcatgggttccttgtccactcagtgatccacttgagctgaagctgagtagcaagagggcaaagccaaatcttgagctgaaactgcatgattttggccctgatcccgatgattgttttcttggcttgactttagcagtaaagcccagtgtttcaaacttagatgtccaaaatgtttctcagggtgtcagaagagagaacatgctattttgctcagatttcaatgatcattcagaccagtcagtattttggacattattatcgcctgatccaaatggagttcataactcagcagagacttcattgtcattgtcattcaggtaa 867 0.0 MRQVLQGLSHMHKRGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLRAPYYTPAVDMWAVGAILAELFTLTPLFPGESEIDQLYQIYGILGMPDSTAFTVGANNSQLLDLVAHEVVPPVKLSNIIPNASLEAIDLITQLLHWDPSRRPDADQSLQHPFFHVDAWVPCPLSDPLELKLSSKRAKPNLELKLHDFGPDPDDCFLGLTLAVKPSVSNLDVQNVSQGVRRENMLFCSDFNDHSDQSVFWTLLSPDPNGVHNSAETSLSLSFR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00826 288 SUPERFAMILY Protein kinase-like (PK-like) 1 180 IPR011009 -
Pste6g00826 288 SMART serkin_6 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00826 288 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 203 - -
Pste6g00826 288 FunFam Probable serine/threonine-protein kinase DDB_G0268078 1 186 - -
Pste6g00826 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Pste6g00826 288 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
Pste6g00826 288 Pfam Protein kinase domain 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00826 288 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00826 Pste-Chr6 3190441 3197591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00826 1 179 Core Cell Cycle Gene Families AT2G38620 43.407 2.34e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pste6g00826 Pkinase 5.5e-47 CL0016