Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00814 CCAGACAAGTTTTGTGTTGTGTATGTCTCTGGATATGACTTGTTTAGTCACTTTGTTCCACAGGCCACTCTAAACTCCACGCACGCATTGTTCTGGCCAAGGCAAATCCCAGAATGGGTGTCGACTATTATAAACTTCTTCAGGTGGATCGAAGTGCCAGCGATGAGGATCTCAAGAAGGCTTATCGGAGGCTTGCTATGAAGTGGCACCCTGATAAGAACCCTAACAACAAAAAGGATGCTGAGGCCAAATTCAAGCAAATCTCAGAAGCCTATGATGTTTTAAGTGATCCGCAAAAGAGGGCAGTGTATGATCAGTATGGTGAGGAGGGGTTGAAAGGGCAGGTGCCTCCTCCGGGAGCTGGTGGATTTTCCAGTGGCAGTGATGGTGGACCCACAATGTTCCGTTTCAACCCGAGAAGTGCAGATGATATATTCTCTGAGTTTTTTGGGTTTTCAAGTCCCTTTGGAATGGGGGATATGGGTGGCCGTGCCGGGCCATCTGGCTTTCCCAGGTTTGGAGAAGACATTTTTGCTTCTTTTAATAGGAGTGGGGCTGGAGAAGGGTCTGTCAATGCACAAAGGAAAAGTTTGCCTATCGAGAGAACATTGCACTGCAGTTTGGAGGATTTGTACAAAGGGACTACAAAAAAAATGAAGATTTCAAGGGATGTGCTTGATGCCAGTGGGAAGCCCACCACTGTAGAGGAAATTTTGACCATTGAGATCAAGCCAGGTTGGAAGAAGGGAACAAAAATAACTTTTCCAGAGAAGGGAAATGAACAAAGAGGAATCACTCCGGCGGACCTTGTTTTCATTATTGACGAGAAACCTCATGGTGTCTTCAAAAGGGATGGCAATGATCTCGTTGTGACTCAGAAGATATCTCTTGTTGAAGCTCTTACAGGCTACACAGCACAGTTGACAACCCTTGATGGGAGGACTCTCACTATCTCCACCAACTCCATTGTTAGTCCTACCTACGAAGAAGTTATCAAAGGAGAGGGTATGCCTATTCCCAAAGAACCTTCCAAGAGGGGAAACTTGAGGGTCAAGTTTAATATCAAGTTCCCCTCAAGACTTACATCAGAGCAGAAAACTGGCATTAAACGATTATTGGCACCTTCATAGACTCTGATGACGCCTCTCCTTTAGCACATATCAAATCGTGAAGGATTGGAATTAATTTTACTCAGTTTTCACTTTTCAAATGGAAATTCTTTTCTTTTGTGAGTTGGTTTTCAGTTAGAACAGTTTGTTAGATCTTTGATATTTGTTTGCTGTTTCATATTTTTAGTTTTGGTATTCTAATTAAAAAAGAATCTGTTAGCTATTGTCTTAATGTTTCTAGCTGTTTTCTTATTTCTAGTGTTTTGGAAGAATTCAGTATATACTCTTGAAGAGAAGGATATTTTTACTCTTGAAGAGAAGGATATTTTTATCTGTCATCTATTTCGTTGTTGTGTACCTTAATCATTTCAGAAATCCATACTCGGGAGTTTGGAGGGGTGATATTACATTGTATATTCGGCTAAGAAGTAGGAACAATGGATATGAGAGGATCAAAACCTAAATCATATTAAATTGTTAATTAGTAGCATCCATGTGTCATCCTGTGACTGTTATGAGAGATATTCCTTTTAACTGAA 1648 0.4102 MGVDYYKLLQVDRSASDEDLKKAYRRLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSSGSDGGPTMFRFNPRSADDIFSEFFGFSSPFGMGDMGGRAGPSGFPRFGEDIFASFNRSGAGEGSVNAQRKSLPIERTLHCSLEDLYKGTTKKMKISRDVLDASGKPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGITPADLVFIIDEKPHGVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRTLTISTNSIVSPTYEEVIKGEGMPIPKEPSKRGNLRVKFNIKFPSRLTSEQKTGIKRLLAPS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00814 338 FunFam Dnaj homolog subfamily b member 158 239 - -
Pste6g00814 338 Gene3D - 161 239 - -
Pste6g00814 338 CDD DnaJ 4 59 IPR001623 -
Pste6g00814 338 FunFam DnaJ subfamily B member 13 241 321 - -
Pste6g00814 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 241 IPR008971 GO:0006457|GO:0051082
Pste6g00814 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pste6g00814 338 SMART dnaj_3 3 62 IPR001623 -
Pste6g00814 338 Gene3D - 241 321 - -
Pste6g00814 338 Pfam DnaJ domain 4 67 IPR001623 -
Pste6g00814 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 329 IPR008971 GO:0006457|GO:0051082
Pste6g00814 338 MobiDBLite consensus disorder prediction 72 96 - -
Pste6g00814 338 SUPERFAMILY Chaperone J-domain 3 98 IPR036869 -
Pste6g00814 338 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Pste6g00814 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pste6g00814 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Pste6g00814 338 CDD DnaJ_C 162 323 - -
Pste6g00814 338 Gene3D DnaJ domain 3 123 IPR036869 -
Pste6g00814 338 FunFam DnaJ subfamily B member 13 3 122 - -
Pste6g00814 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pste6g00814 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pste6g00814 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pste6g00814 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00814 Pste-Chr6 3123853 3128761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00814 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.19e-09 57.0